Gene Rpic_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3234 
Symbol 
ID6287274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3379819 
End bp3380784 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content64% 
IMG OID642626810 
ProductABC transporter related 
Protein accessionYP_001900788 
Protein GI187930301 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.67956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TCGAAATCGC TGACGTCCGC AAGCGCTACA AGTCGTTGCA AGCGCTCAAG 
GGCGTAAGCC TGTCTGTCGA GCAGGGCGAG TTTTTCGGCC TGCTGGGCCC CAACGGCGCG
GGCAAGACCA CGCTGATCTC CATCCTCGCG GGCCTGAATC GCGCCGATTC CGGCAGCGTG
CGCGTGCTCG GCCACGACGT CGTCTCCGAT TACCGCACTG CGCGCCGCAA GCTCGGCGTG
GTGCCGCAGG AACTGGTGTT CGATCCGTTC TTCACGGTGC GCGAAACGCT GCGTCTGCAG
TCGGGCTACT TCGGCCTGAC GAAAAACGAT GACTGGATCG ACGAGGTCAT GGCCAATCTG
GACTTGACCA ACAAGGCCGA CGCCAACATG CGCGCGCTGT CGGGCGGCAT GAAGCGCCGC
GTGCTGGTGG CGCAGGCGCT GGTGCATCGC CCGCCCGTGA TCGTGCTGGA CGAGCCGACT
GCCGGTGTGG ACGTCGAGTT GCGCCAGACG CTGTGGAAAT TCATCTCGCG CCTGAATCGC
GAGGGCCACA CCGTCGTGCT GACCACGCAC TATCTGGAAG AGGCGGAATC CCTGTGCGAC
CGCATTGCCA TGCTGAAGTT TGGCGAGGTG GTGGCGCTCG ATCGCACGGC GAATCTGCTG
TCGCAATTTG CGGGGCTGCA ATTGGTGCTG AGCTTTGCGA AGGGCGCGCT GCCGGCATCG
CTGGAAAGCC TGCGCCTGCC GGGCAACCAC GGCGAGCGCG GCGTCCGTCT GCGCCTGTCG
GGCTACGGTG AGGTCGAACA GATTCTCTCC ATGTGCCGCC TTGCCGGATG CGAGATCGAC
GATATGGAAG TCGCCAAGGC CGATCTGGAA GACGTGTTCG TGCAGATCAT GCGCCGCGAA
GGCGGATTGC CCCTCGGGCC TCAGGCGCCT GCCATTCCTG ATTCTGCGCT GGAGCCCGCC
GCATGA
 
Protein sequence
MKAIEIADVR KRYKSLQALK GVSLSVEQGE FFGLLGPNGA GKTTLISILA GLNRADSGSV 
RVLGHDVVSD YRTARRKLGV VPQELVFDPF FTVRETLRLQ SGYFGLTKND DWIDEVMANL
DLTNKADANM RALSGGMKRR VLVAQALVHR PPVIVLDEPT AGVDVELRQT LWKFISRLNR
EGHTVVLTTH YLEEAESLCD RIAMLKFGEV VALDRTANLL SQFAGLQLVL SFAKGALPAS
LESLRLPGNH GERGVRLRLS GYGEVEQILS MCRLAGCEID DMEVAKADLE DVFVQIMRRE
GGLPLGPQAP AIPDSALEPA A