Gene Rpic_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3218 
SymboltatB 
ID6286912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3368585 
End bp3369097 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID642626794 
Productsec-independent translocase 
Protein accessionYP_001900772 
Protein GI187930285 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC TCGGCATTTC CAAGCTGGCG CTGATTGGCA TGGTGGCGCT CGTCGTCATC 
GGGCCCGAGC GTCTGCCCAA GGTGGCGCGT ACCGCTGGCG CCTTGCTTGG CCGCGCACAG
CGCTACATCG CCGATGTGAA GGCCGAGGTC AGCCGCGAAA TCGAGCTCGA GGAACTGCGC
AAGATGCGCA CCGACTTCGA GCAGGCCGCG CGCAATGTCG AGCAGACCAT CCACCAGGAG
GTCAGTAAGC ACACGACCGA GATCAACGAA CGCCTGAACG AGGCGCTTGG TGATCCCGCG
CACACGGCGA CCTCCGCCCC CGACTGGCGC CCGGCACCGG GCAAGTCGCG CAACGGTCGC
AACAGCTGGC GCAACAAGCA GCTCTCGATG CCCAAGTGGT ACCGCCAGAA GCAGGGCGTG
CGCATGTGGG CGCAATCGGG TGCGGCACGC GTCAAGCGTC ATCGTCCGCC CATCGTTGCC
GCACAGTCGC GTGCGCGCTC CTTCTTCGAA TGA
 
Protein sequence
MIDLGISKLA LIGMVALVVI GPERLPKVAR TAGALLGRAQ RYIADVKAEV SREIELEELR 
KMRTDFEQAA RNVEQTIHQE VSKHTTEINE RLNEALGDPA HTATSAPDWR PAPGKSRNGR
NSWRNKQLSM PKWYRQKQGV RMWAQSGAAR VKRHRPPIVA AQSRARSFFE