| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3213 |
|---|
| Symbol | |
|---|
| ID | 6286375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3361890 |
|---|
| End bp | 3363419 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642626789 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001900767 |
|---|
| Protein GI | 187930280 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGC GGCCCGCCTG GCTTCGGCTG CCGCGCAGCC TGAAACTCAC GCTGCTCTGG
TTGCTGCTGC CGGGGCTGGT AGGTGTGCTG GCGATCGACA TCGTCTCGGC GTACCAAGCG
CTGCGTGGCG CGACCGACCG CGCGTACGAT CGCGCCCTGC TCGGCTCGGT GCGCGCCATC
GAAAACGGCG TGACGATCGA GCGCGGCCAG GTGCAGGTCA ACGTGCCGTA TGTGGCGCTG
TCCATGTTCG AATCGACGGC GCAGAGCAAC GTCTATTACC GCGTCGCTTT CGAGCCCTTG
CCGGGCAAGG CGCCTGAAGC GGCGCTGACC GGCTACGACG ATCTGCCGCT GCCCGTCACC
CGGCTGGAAA ACGACACCCC GCTCTTCTAC GACGCGACAT ACCACGACGA GCCCGTACGC
GTGGCCGCCG TGGCCAAGCC GCTCTATCAA CCGGGGCTGC CGGCGCGCAT CGTCATTCAG
GTGGCAGAAA CCATCGAGAC GCGCCGCGCG CTGCAGCAGG CGGTGTGGCG CGGCACGCTG
CTGCGCGATG CAGCGCTGGT GGCGGTCAGC GCCGCGCTGC TGTGGCTCGG CGTAACCGTC
GCGCTGCGGC CGCTCAGTCG CCTGGCACGC AGCATCGGCG TGCGCGCGTC GGATGACCTG
CGTCCGCTCG ACGCCACCGA CGTGCCTGCA GAAGTCCGCC CGCTGGTCGA CGCGATCAAC
CACCACATTC ATCGCTATGC CGAACTTGCG GAGGCGCAAA GCCAGTTCCT AGCCGATGCG
TCGCACCAGT TGCGCACGCC GCTGGCCGTG CTGCTCACGC AAGCGGAATA CGCACTGCGC
GAAACCGACC CGGTGCGCGT ACGCGAAAGC CTGTCCGCCA TCATCGCGCG CCTGCAGTCG
ACGAACCGGC TGACCACACA GCTGCTCGCC CTTGCCCGCG CCCGGCATGC GGGGCAGGAT
GCGCCGGCCG AAACCTTCGA CCTGGGTGTT TTGGCACGCG ACGTGGTGGT CGATGCGCTG
CCGTTGGCGC GTGAAAAACA GCAGGACCTC GGCTGGGATG ACGGCGGCCT CGTCATGGCG
CTGCCCGTCA TCGGCTATCC GGCCTTCCTG CGCGAGGCGC TCTCCAACCT CGTGCACAAC
GCCATCCGCT ACACGCCGGC CGGCGGACGC ATCACCGTAC GCGCCACGGC TGACGGCGAT
GCCGCACTGG TCTGCGTGGA CGACACCGGG CCGGGCATGA ACGCCGACGA GCGCGCACAC
GCGTTCCAGC GCTTCCGCCG AGCGCACGAG GGCGGAAGTC GCTCGGGTAA ACCCAAGGTC
GCGCCCAAAG ACGCCCGCTA CGCCGCCGAA GGCTCCGGCC TTGGTCTGGC CATCGCGCGA
GCCTATGCAG CGCGTAGCGG CGGGCAAATC GAGCTGGCCG ACGGGGAGCC GAACGAGTAC
GGCGGCGTCG GTTTGTCGGC GCGGATCCGC GTGCCGCTGG CGGCTGCGGC AGCCTCGACC
GAGCATGCTG CGACGCAGCA GCCGCAATGA
|
|---|
| Protein sequence | MMQRPAWLRL PRSLKLTLLW LLLPGLVGVL AIDIVSAYQA LRGATDRAYD RALLGSVRAI
ENGVTIERGQ VQVNVPYVAL SMFESTAQSN VYYRVAFEPL PGKAPEAALT GYDDLPLPVT
RLENDTPLFY DATYHDEPVR VAAVAKPLYQ PGLPARIVIQ VAETIETRRA LQQAVWRGTL
LRDAALVAVS AALLWLGVTV ALRPLSRLAR SIGVRASDDL RPLDATDVPA EVRPLVDAIN
HHIHRYAELA EAQSQFLADA SHQLRTPLAV LLTQAEYALR ETDPVRVRES LSAIIARLQS
TNRLTTQLLA LARARHAGQD APAETFDLGV LARDVVVDAL PLAREKQQDL GWDDGGLVMA
LPVIGYPAFL REALSNLVHN AIRYTPAGGR ITVRATADGD AALVCVDDTG PGMNADERAH
AFQRFRRAHE GGSRSGKPKV APKDARYAAE GSGLGLAIAR AYAARSGGQI ELADGEPNEY
GGVGLSARIR VPLAAAAAST EHAATQQPQ
|
|---|
| |