Gene Rpic_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3212 
Symbol 
ID6286374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3361192 
End bp3361893 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID642626788 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001900766 
Protein GI187930279 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.419022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCT TGCTGGTGGA GGATGAGGAA GAATTGGCCG CATGGCTGGC GCGCGCGCTG 
GCGCAAAGCG GCTTCGTGAT CGAGCGCGCC GCTGACGGCG TCATCGCGGA AGCCTTCCTG
GGCTCCGGAG AATTTGACGC AGTGGTGCTG GACCTGCGCT TGCCGCGCAA GGATGGCTTT
GCCGTGCTGG CCGACATGCG CGCGCGCGAC GACCGCACGC CGGTGTTGAT CCTCACGGCG
CAGGGCGCAC TGGATGAGCG CGTGCGCGGG CTCAATGCCG GCGCGGACGA TTTCCTCACC
AAGCCGTTCG CGCTGTCCGA GCTGGAAGCG CGGTTGATGG CGCTTATCCG CCGCAGCCGC
GGCCGGGCGT TCCCGCGCCT GCGTTGCGGG CCGCTGGAAT TCGATACCGG ACGCAAGGCA
TTCCTGCTGT CGGGCGAGCC GCTATCGCTC ACGCCGCGCG AGCACGCCGC ACTGTCGGCA
CTGCTGCACA AGACCGGCCA GCCGATCAGC AAGGTGCATC TGTTCGACAA GGTCTTCAAC
CTGGACAGCG ATTCCAGCCC CGACGCAGTC GAGGTGGTCG TGCACCGCCT GCGCAAGAAG
CTGGCGGGCA CGGGCGTGCA GATCGTCACC GTACGGGGGC TGGGTTACCT GCTCGAGGCC
GGCGATGGTG AAGGGCCCGC CGCCGGCGAC AGCAGCGCAT GA
 
Protein sequence
MRILLVEDEE ELAAWLARAL AQSGFVIERA ADGVIAEAFL GSGEFDAVVL DLRLPRKDGF 
AVLADMRARD DRTPVLILTA QGALDERVRG LNAGADDFLT KPFALSELEA RLMALIRRSR
GRAFPRLRCG PLEFDTGRKA FLLSGEPLSL TPREHAALSA LLHKTGQPIS KVHLFDKVFN
LDSDSSPDAV EVVVHRLRKK LAGTGVQIVT VRGLGYLLEA GDGEGPAAGD SSA