| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3209 |
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| Symbol | |
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| ID | 6289152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3356829 |
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| End bp | 3358043 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626785 |
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| Product | protease Do |
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| Protein accession | YP_001900763 |
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| Protein GI | 187930276 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCC GCTTTTGGCT GTTTTTTGCG CAAGCCGTCA CGGTCGTCCT GGCCGTCTGG
TTTGTGATCG CCACGCTCAA GCCTGATTGG CTGCAGCGCG GCAAGGTCGC AGTGCAATCC
GGCTCGCCCA TCGTCGCGCT GAAGGAAGTC GCGCCGATCG GCCACGGCGG CACCTCCAGC
AACTCCTACG CGGAAGCGGC CAAGGTGGCG ATGCCGGCGG TGGTCAACAT CTTCAGCAGC
AAGAACGCGC CGAAGCGTGG CAGCAGCCCA CAAGCCAGCG CAGATCCGTG GTTTCGCTTC
TTCTTCGGAG ACCGCGCTCC TGAGCAACGC CAAGAACCCA CGGCCAGTCT CGGCTCGGGC
GTGATCGTCA GCTCGGAAGG CTACATTCTA ACGAACCACC ACGTAGTAGA CGGGGCCGAC
GAGATCGAAG TCGCCCTGAC CGACGGCCGC AAGGCCAACG CGAAGGTGGT CGGCTCGGAT
CCCGAAACCG ACTTGGCCGT CCTCAAGATC AACCTACCGA ATTTGCCCGC CATTACGCTG
GGCCGGCTGG AGAATGTGCG CGTCGGCGAC GTGGTGCTCG CCATCGGCAA CCCGTTCGGC
GTGGGCCAGA CGGTGACGAT GGGCATTGTC TCCGCACTGG GACGCAGCCA CTTGGGCATC
AACACCTTCG AGAATTTCAT CCAGACCGAC GCCGCGATCA ACCCAGGCAA CTCGGGCGGC
GCCCTGGTTG ATGCCGACGG CAACCTCCTC GGGATCAACA CCGCGATCTA CTCGCGCTCG
GGCGGCTCGC TGGGCATCGG CTTCGCGATT CCGGTATCGC TGGCCAAGCA GGTGATGGAG
TCGATTATCT CGACCGGTAG CGTGGTCCGC GGCTGGATCG GTGTTGAACC GCAGGATGTG
ACGCCGGAAA TTGCCGAGTC GTTTGGCCTG TCGCGCAAGG ATGGCGCGCT GATTGCCGCC
GTGGTCCAAG GTGGCCCGGC GGACAGGGCG GGCCTGCACC CGGGGGACAT TCTCACCAGC
GTGAATGGTC AACCGATCCT GGATACGACG GCGCTGCTGA ACAGCATCGC GCAGCTGAAA
CCCGGTGCGG AAGCCAAGGT GACGGTGTCG CGCAAGGGCA AGGCGGTAGA GCTGACCATC
GTTGTCGGCA AACGTCCGCC GCCAACGCGC CGCAACGTAC CGATGCCCTC GCAGGACGAC
GAAGAACAGC AGTAA
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| Protein sequence | MLRRFWLFFA QAVTVVLAVW FVIATLKPDW LQRGKVAVQS GSPIVALKEV APIGHGGTSS
NSYAEAAKVA MPAVVNIFSS KNAPKRGSSP QASADPWFRF FFGDRAPEQR QEPTASLGSG
VIVSSEGYIL TNHHVVDGAD EIEVALTDGR KANAKVVGSD PETDLAVLKI NLPNLPAITL
GRLENVRVGD VVLAIGNPFG VGQTVTMGIV SALGRSHLGI NTFENFIQTD AAINPGNSGG
ALVDADGNLL GINTAIYSRS GGSLGIGFAI PVSLAKQVME SIISTGSVVR GWIGVEPQDV
TPEIAESFGL SRKDGALIAA VVQGGPADRA GLHPGDILTS VNGQPILDTT ALLNSIAQLK
PGAEAKVTVS RKGKAVELTI VVGKRPPPTR RNVPMPSQDD EEQQ
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