Gene Rpic_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3208 
Symbol 
ID6289151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3356063 
End bp3356809 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID642626784 
Productprotein of unknown function DUF34 
Protein accessionYP_001900762 
Protein GI187930275 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGAA AAGAACTTGA ATTGTACTTG AACGACCTGT TGCAGGCGGC CCGTTTTCGG 
GACTATTGCC CCAATGGTCT CCAGGTACAG GGGCGCGACA CCATTGCGCA TATCGTGACG
GGGGTGACCG CTAGCCTGGC GCTGATCGAA GCCGCCATCG AAGCGCGTGC CGACGCCATC
CTCGTGCATC ACGGTTACTT CTGGAAGGGA GAGGATGGCC GTGTCGTAGG CCAGAAGCAT
GCGCGCTTGA AGCAACTTCT GGCGCACGAT CTCAACATGT TCGCGTATCA CTTGCCGCTC
GATGCGCATC CTGGGCTCGG CAACAACGCG CAACTGGGTG CGTTGCTGGG CATCTCGCCT
CAGGGCAGGT TCGGCGACGA CGAACTTGGC TGGATTGGTA CGCTTGCCGA AGCAACCACG
CTGGGCGATT TCGCGCAGAC GGTGTCGGCA AAGCTGAACC GGGAGCCGCT TGTGATCGGC
GAGGGGGATC GCCCGGTGCG CACAATCGGC TGGTGCACAG GCGGTGCCCA AGGCTGGTTT
GATGCCGCCG TGGCCGCCGG TGTAGACGTG TATCTGAGCG GTGAAGCGTC GGAGCAGACC
ACGCATCTTG CGCGTGAATC GGGTGTTGCC TATATCGGTG CGGGTCACCA CGCCACCGAG
CGCGGTGGCG TTCGGGCGCT CGGCACTCAT CTGGCCGAGC GCTTCGGTGT GCGTCACACC
TTCATCGATA TCCCGAATCC GGTGTGA
 
Protein sequence
MDRKELELYL NDLLQAARFR DYCPNGLQVQ GRDTIAHIVT GVTASLALIE AAIEARADAI 
LVHHGYFWKG EDGRVVGQKH ARLKQLLAHD LNMFAYHLPL DAHPGLGNNA QLGALLGISP
QGRFGDDELG WIGTLAEATT LGDFAQTVSA KLNREPLVIG EGDRPVRTIG WCTGGAQGWF
DAAVAAGVDV YLSGEASEQT THLARESGVA YIGAGHHATE RGGVRALGTH LAERFGVRHT
FIDIPNPV