Gene Rpic_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3204 
Symbol 
ID6289679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3352584 
End bp3353327 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content62% 
IMG OID642626780 
Productcytochrome c1 
Protein accessionYP_001900758 
Protein GI187930271 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.831263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TGCTTGCGAT TTTCGCCTTG GCCGGTCTCG TGTTTGCCGC GCCCGTGATG 
GCCAATGAGG GCGGCGTGCC GCTCGATCCG GCGCCCAACC AGTCCAGCGA CACGTCTGCG
CTGCAGCGCG GCGCCAAGCT GTTCGTCAAC TACTGCCTGA ACTGCCACGG CGCGAGCGCC
ATGCGCTACA ACCGCCTGCG CGACATCGGT TTGAGCGAGG AGCAGATCAA GCAGAACCTG
CTGTTCTCGT CGGACAAAGT CGGCGACACG ATGCACATCG CCATGGACCG CGAGGACGCA
AAGAAGTGGT TTGGCGCCGT ACCGCCGGAC CTTTCGGTGA TCGCCCGCGC GCGCGGCAGC
GACTGGCTCT ACACCTACCT GCGCACGTTC TACCGTGACG ACACGCGTCC GACCGGCTGG
AACAACCTGG TCTTCGACAA GGTCGGCATG CCGCATGTGC TGTGGGAGCT GCAAGGCCAG
CAAGTGGCGA AGTACGCCGA AGTGAAGTCC GAGCACGGCG AGGCCGAGAA GAAGCTCGTC
GGCCTTGAGG TGTCGGTCCC CGGCAAGATG AACAAGGTCG AATATGACCA GGCGGTGGCC
GACCTGGTCA GCTATTTGGA CTGGATGGCT GAGCCCGCCG GCAACTTGCG CAAACGTCTC
GGCGTCTGGG TACTGTTGTT CATTGGCGTG TTCTTCGTGC TGGCCTGGCG CCTGAATGCG
GCCTATTGGA AGGACATCAA GTAA
 
Protein sequence
MKKLLAIFAL AGLVFAAPVM ANEGGVPLDP APNQSSDTSA LQRGAKLFVN YCLNCHGASA 
MRYNRLRDIG LSEEQIKQNL LFSSDKVGDT MHIAMDREDA KKWFGAVPPD LSVIARARGS
DWLYTYLRTF YRDDTRPTGW NNLVFDKVGM PHVLWELQGQ QVAKYAEVKS EHGEAEKKLV
GLEVSVPGKM NKVEYDQAVA DLVSYLDWMA EPAGNLRKRL GVWVLLFIGV FFVLAWRLNA
AYWKDIK