| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3185 |
|---|
| Symbol | |
|---|
| ID | 6287260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3337164 |
|---|
| End bp | 3337676 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642626760 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001900739 |
|---|
| Protein GI | 187930252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00000762483 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAAT ACCGACCCCG AACCATCCAA GAGCTGGCCG TGTGTACCTG TGACCGCTGC
CAGCGTCGCT TGATCGCCGA TGAACCTGGC GACTGGCAGG AACGGTTGTC GTTTGATCAC
TCCTGCGGTT TCGACTCGGT GTTTGGTGAC GGCAACACAG TCAGCCTCGA TCTGTGCCAG
CACTGTGTAC GTGAAGTGTT GGGCGAGTGG TTGCGCATCA CGCCACCCGA AAAGCGGATT
GAACGCAGCG ACATTGCGCG CCATCCGCGT ATGAAGAAGT TCGCCAAATT CGGGCCGGAT
TTCATGGCCG AAGGCCGTGG CGAGCATGGG CAGGATAAGA GGGGGCAAGC AGCACGCCCA
TTGACCGCTC TCAAAGGCAT CATCCGGAAA CCAGCGAAGC CGGTTTCGAT CGAGGGCATG
AATTCGGCGT TTGGCAATGA TGCTGGTCCT CCAAAGGACG CCCGGCCCTC AAGCAAAGGA
AAGTCGACGA AGCGGCAAGG GGCCGGAAAA TGA
|
|---|
| Protein sequence | MREYRPRTIQ ELAVCTCDRC QRRLIADEPG DWQERLSFDH SCGFDSVFGD GNTVSLDLCQ
HCVREVLGEW LRITPPEKRI ERSDIARHPR MKKFAKFGPD FMAEGRGEHG QDKRGQAARP
LTALKGIIRK PAKPVSIEGM NSAFGNDAGP PKDARPSSKG KSTKRQGAGK
|
|---|
| |