| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3178 |
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| Symbol | |
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| ID | 6287335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3332548 |
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| End bp | 3334044 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642626753 |
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| Product | N-6 DNA methylase |
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| Protein accession | YP_001900732 |
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| Protein GI | 187930245 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0125713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000000157011 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCAACC CACAAATTAC TCTCAGTCAG CTTGAAGGCC ACCTATGGGA GTCCGCCAAC
ATTCTGCGCG GCCCGGTTGA TGCTGCTGAC TTCAAGACTT ACATCTTCCC TCTGCTGTTT
TTCAAGCGCA TCTGCGACGT CTGGGACGAG GAATACCAGG AGATCGTTGA CGAGACGGGC
GATGAGGAAC TGGCCTGGTT CCCGGAGTCA CACCGCTTTC AGATCCCAGA GGATTGCCAC
TGGAACGATG TTCGCGCCAA AGCGAGCAAT GTCGGTACCG CGCTGCAGCG CGCGATGCGG
GAAATTGAGA GAGCCAACCC GGACACCCTA TATGGCGTGT TCGGCGATGC CCAGTGGTCA
AACAAGGAGA GGCTGTCGGA TGCCCTCCTC AAAGACCTGA TCGAACATTT TTCCAAGCTG
CCGTTTGGCA ACAAGAACGT CAACTCGGAT CTGCTCGGCG ACGCCTACGA ATACCTGATC
AAAAAATTCG CCGACGCCAC CAACAAAAAG GCCGGCGAGT TCTACACCCC ACGCAGTGTG
GTGCGGCTGA TGATCGACAT GCTCGATCCC AAGGAGGCCG AGACCATCTA CGACCCGGCC
TGTGGCACCG GCGGCATGTT GCTGGCAGCC GTGCAACACG TCAAAGAGAT GCACGGCGAC
GTCAAGCGGC TGTGGGGTAA GCTATACGGG CAGGAGAAAA ACCTCACCAC TTCATCCATC
GCGCGGATGA ACCTGTTCCT TCACGGCATC GAGGACTTCC AGGTGGTGCG CGGAGACACG
CTGCGCAACC CGGCCTTCTT CGAGGGCGAC CGACTGGCTA CCTTCGACTG CGTGATCGCC
AACCCGCCGT TCTCTTTGGA AAAGTGGGGC GAGGACCTGT GGTTGAACGA TCCCTTTGGT
CGCAACTTTG CCGGTCTGCC GCCCTCGTCC AGCGGTGACT TCGCCTGGGT GCAGCACATG
GTCAAGTCGA TGGCCGACGC GACCGGCCGC ATGGCAGTGG TGCTACCACA AGGCGCCCTG
TTCCGCAAAG GCGTCGAAGG CAGCATCCGC CAGAAACTAC TGGAAATGGA TCTAGTCGAT
GCCGTGATCG GTCTGGCGCC GAATCTGTTC TACGGCACGG GACTCGCCGC TTGCATCCTG
TTGCTGCGCA AGCGCAAGTC GGCTAAGCAC AAGAAGAAGG TGCTGATCGC CGATGCGTCG
CGCCTGTTCC GCCGGGGGCG CGCGCAGAAC TATCTGGAGG CCGAGCACGC CGCTGAGATC
CTCGGGTGGT ATCGCGGCTT TGCCAATGTG CAGGATGCGG TTCGAGTGGT CAGCCTCGAT
GAGATTAAGG CCGAGGACTG GACACTGAAC ATTTCGCGCT ACGTGTTACC ACCGCTGCGG
GAAGACATTC CTCCTTTGCC AGTCGCCATT GCATCCTTCA AGGATGCACT CACCCACTGC
CGCGAGGCAG AGGAACGGCT CGCGCAGGTT ATGACCAAAG GAGGATGGCT TAAATGA
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| Protein sequence | MSNPQITLSQ LEGHLWESAN ILRGPVDAAD FKTYIFPLLF FKRICDVWDE EYQEIVDETG
DEELAWFPES HRFQIPEDCH WNDVRAKASN VGTALQRAMR EIERANPDTL YGVFGDAQWS
NKERLSDALL KDLIEHFSKL PFGNKNVNSD LLGDAYEYLI KKFADATNKK AGEFYTPRSV
VRLMIDMLDP KEAETIYDPA CGTGGMLLAA VQHVKEMHGD VKRLWGKLYG QEKNLTTSSI
ARMNLFLHGI EDFQVVRGDT LRNPAFFEGD RLATFDCVIA NPPFSLEKWG EDLWLNDPFG
RNFAGLPPSS SGDFAWVQHM VKSMADATGR MAVVLPQGAL FRKGVEGSIR QKLLEMDLVD
AVIGLAPNLF YGTGLAACIL LLRKRKSAKH KKKVLIADAS RLFRRGRAQN YLEAEHAAEI
LGWYRGFANV QDAVRVVSLD EIKAEDWTLN ISRYVLPPLR EDIPPLPVAI ASFKDALTHC
REAEERLAQV MTKGGWLK
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