Gene Rpic_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3171 
Symbol 
ID6288846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3321984 
End bp3322454 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID642626746 
Producthypothetical protein 
Protein accessionYP_001900725 
Protein GI187930238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00448166 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000130626 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACGACAA AGAATGAGCA ACTTCAATCC ATAGTTGGAG AGTATCGTCG TGCCGGCAAC 
AAATGGCCCG CAACAATGCG GGAAGTCGCG GCATGGGCGA TTAACGCGAA GCTTTGGGCG
CCCCAGCCTT CAGCCGTTAT CGGTCAGTGC GCAGAGGAGC TATCGCGAGC GCTTCGGGAC
GAGTACGTTA CTGACCCTCA AGGCCGCCGA ATTCGAACCA AGCACGCAGC GGCATACACC
ACAGATGAAG GTGAGCAGCT TGTCCTATGG GACGATATTC GCACGGCACC AGCTGACCAT
ATGCGACGCG CTTTCCAACA GCGCCGGCAT CAGATCCTCG GTGACTGCAA GCAACTGAAA
TCGGACGTCG ATAGCTTCAA CCAGAACCGG CAGCCACCGG AACCCATTCA GATCGTCTTC
GATTTCACGT TGGACTTGGA GGAGGCCGCT TACCTGAAGC GAAGCGCTTA G
 
Protein sequence
MTTKNEQLQS IVGEYRRAGN KWPATMREVA AWAINAKLWA PQPSAVIGQC AEELSRALRD 
EYVTDPQGRR IRTKHAAAYT TDEGEQLVLW DDIRTAPADH MRRAFQQRRH QILGDCKQLK
SDVDSFNQNR QPPEPIQIVF DFTLDLEEAA YLKRSA