| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3164 |
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| Symbol | |
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| ID | 6288057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3315564 |
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| End bp | 3317207 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626739 |
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| Product | natural resistance-associated macrophage protein |
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| Protein accession | YP_001900718 |
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| Protein GI | 187930231 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000567211 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAAT TCGCTTCGGG CATCGACGCA CCGCCACGTC ATGCCGCACT CGACGACGCT
CATGTGGGCG ACATCCGCGG CGCGCTCGGC ACCATCGCGC ATCACGATAC GGGCGCTCGT
AACAGCTGGC GCGCGCGTCT GCGGACGCTG CTCGCCATCC TCGGGCCCGG CCTGATCGTG
ATGGTCGGCG ACAACGACGC CGGCGCCTTC GGCACGTACA CGCAAGCCGG GCAGAACTAC
GGCACCACGC TGTTGTGGAC GCTGTTGTTG CTCATCCCCG TGCTGTACGT GAACCAGGAG
ATGGTGCTGC GCCTGGGCGC CGTCACGCGC GTTGGCCATG CGCGGTTGAT CTTTGCCCGC
TTCGGCAGGT TCTGGGGCAG CTTCTCTGTC ATCGATCTGT TTCTGGTGAA CGCGCTGACG
CTCGTGACAG AGTTCATCGG TATCAGCCTG GCGCTGGAGT ACCTCGGCAT CCCTAGACAC
TGGGGCGTGT GTGCGGCGGC GGCGCTGGTG ATGCTGGCTG CCTCCACCGG CGACTTCCGC
CGCTTCGAGC GCTTTGCGCT GGCGCTGGTG GCCGGCAGTC TCACGCTCAT TCCCGTGTTC
GTGATGGTCC ATCCGCCAAT TGGGCAGGTG GCACGCGACT TCTTTGTGCC CGCGCTACCG
GCCGGCGCAC CGCTAGCGGA GGTCATGCTG CTGATCATCG CCATCGTCGG GACGACCGTG
GCGCCGTGGC AATTGTTCTT CCAACAGAGC TACGTGATCG ACAAGCGCAT CACCGCCCGT
TTCATCCGCT ATGAACGCGC GGATCTGTGG CTGGGCATCG TCCTCGTGAT TGCCGGCGCG
GTGGCGATGA TCGCCTTCAG CGCCCAGGCC TTTCACGGTT CGCCAGAGTT CGGCAACTAC
ACCGATGCGC TCGGCACGGC GCACGGTCTG GAGCGCCACT CGGGCCGCTG GGCCGGTGTC
CTGTTTGCGA TTGCGCTGCT GGATGCCAGC ATCATCGGCG CCTGTGCGGT GTCGTTGTCG
ACCGCGTATG CGATCGGCGA CGTGTTTGCC GTGCGGCACT CGCTGCATCG CAAGCCGACG
GAAGCCAAGG GCTTCTACGC GATCTACTTC GGGCTGACCT TGCTGGCCGC AGGATTGGTG
CTGACGCCCG GCGTGCCGCT CGGTTTGTTG ACCAATGCAG TGCAATCGCT GGCCGGCGTG
CTGCTGCCAA GCGCGACAGT GTTCCTGCTG CTTTTGTGCA ACGACAAGGC CGTGCTGGGC
CCGTGGACGA ACGGCCGCGC GATGAACCTC TTCACCGGCG GTGTGGTGGC GGTGCTGGTG
ATGCTCTCCG TCATCCTGAC GGCGGCTGTG TTGTTTCCGG GGATCGGAGA ATTCGAGATC
GGCGCCATCC TGATCGGCGG TTCGCTCATC GCCGTGGTCA TGTCGCTGGT GCTATGGCGC
ATCGAGCGAC GCAGGCACCG GCCGCACCAT CCACAGCGTG TGAGCGTGCT GGATCGCAAT
CACTGGACGA TGCCGCCGCT CGAGCAGCTC ACGCCTGCCC GTTGGACGCC GCTCAAGCGC
ACGTGGATGT TTGTGCTGCG CGGCTACCTC GTGGTGGCTG CGGGGCTGGT GCTGGTACGG
ATTGCCGGGT TGCTCGCCCA ATGA
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| Protein sequence | MTQFASGIDA PPRHAALDDA HVGDIRGALG TIAHHDTGAR NSWRARLRTL LAILGPGLIV
MVGDNDAGAF GTYTQAGQNY GTTLLWTLLL LIPVLYVNQE MVLRLGAVTR VGHARLIFAR
FGRFWGSFSV IDLFLVNALT LVTEFIGISL ALEYLGIPRH WGVCAAAALV MLAASTGDFR
RFERFALALV AGSLTLIPVF VMVHPPIGQV ARDFFVPALP AGAPLAEVML LIIAIVGTTV
APWQLFFQQS YVIDKRITAR FIRYERADLW LGIVLVIAGA VAMIAFSAQA FHGSPEFGNY
TDALGTAHGL ERHSGRWAGV LFAIALLDAS IIGACAVSLS TAYAIGDVFA VRHSLHRKPT
EAKGFYAIYF GLTLLAAGLV LTPGVPLGLL TNAVQSLAGV LLPSATVFLL LLCNDKAVLG
PWTNGRAMNL FTGGVVAVLV MLSVILTAAV LFPGIGEFEI GAILIGGSLI AVVMSLVLWR
IERRRHRPHH PQRVSVLDRN HWTMPPLEQL TPARWTPLKR TWMFVLRGYL VVAAGLVLVR
IAGLLAQ
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