| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3162 |
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| Symbol | |
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| ID | 6288055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3311958 |
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| End bp | 3313934 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626737 |
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| Product | cytochrome o ubiquinol oxidase, subunit I |
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| Protein accession | YP_001900716 |
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| Protein GI | 187930229 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000382924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGGCA AGTTGAGTCT GGAGGCCATT CCGCTGCACG AGCCCATCGT GGTCGTGACG
GTGTCGGCCA TTCTGCTGGG TGGCGCGGGC CTGTTCGGCC TGATCACCTA TCTCAAGAAG
TGGACCTATC TCTGGAATGA GTGGATCACC TCGGTCGACC ACAAGAAGAT CGGCGTGATG
TACTGCATTC TGGCCATCGT GATGCTGCTG CGCGGCTTTG CCGACGCCAT CATGATGCGC
TCGCAACTGG CGGTTGCCTC GGGCGGCGGT GCCGGCTATC TGCCGCCTGA GCACTACGAC
CAGATCTTTA CCGCGCACGG CGTGATCATG ATTTTCTTCA TGGCCATGCC GCTCATGACG
GGCCTGATCA ACCTGATCGT GCCGCTGCAG ATCGGCGCGC GCGACGTGGC ATTTCCGTTC
CTGAACACGC TGTCGTTCTG GCTGGCTGCT GCAGGTGTGG TGCTGATCAA CGTGTCGCTG
GGCGTGGGCG AATTCGCTCG CACCGGCTGG CTGGCGTACC CGCCGCTGTC GGAGCTGGCC
TACAGCCCGG GCGTGGGGGT CGATTACTAC ATCTGGGCCT TGCAGATATC GGGCCTCGGG
ACATTGCTGA CCGGCGTGAA CTTCGTCGCG ACCATCTTCA AGATGCGCGC GCCGGGCATG
ACGCTGATGC GCATGCCGAT CTTCACCTGG ACCGCCCTGT GCGCCAACAT CCTGATCGTG
GCTGCCTTCC CGGTGCTGAC CGTGGCGCTG GCACTGCTGG GTGCCGACCG CTACCTGGAC
ATGCACTTCT TCACGAACGG CGGCGGTAAC GCCATGCTGT ACGTGAACCT GATCTGGATC
TGGGGCCACC CCGAGGTGTA CATCCTGATC CTGCCGGCCT TCGGCATGTT CTCGGAAATC
GTCTCGACGT TCTCGCGCAA GAAGCTCTTC GGCTACACGT CGATGGTGTG GGCGACCGCC
GGTATCACCG TGCTGTCGTT CCTGGTGTGG CTGCACCACT TCTTCACCAT GGGCTCGGGT
GCGAACGTCA ACGCGTTTTT CGGTATCGCG ACGATGATCA TCTCGATCCC GACGGGCGTG
AAGATCTTCA ACTGGCTGTT CACGATGTAC CGCGGCCGCG TCGAGCTGAA CTCAATGATG
CTGTGGACGA TCGGCTTCAT GATCACCTTC GTGATCGGCG GGATGACCGG CGTGCTGCTG
GCTGTGCCGG GCGCCGACTT CCTGCTGCAC AACAGCCTGT TCCTGATCGC TCACTTCCAC
AACACCATCA TCGGCGGCGT GGTGTTCGGT TACCTGGCTG GTATCACGTA CTGGTTCCCG
AAGGCCTTCG GCTTCAAGCT GGACGAGAAG TGGGGCAAGC GCGCCTTCTG GTGCTGGTTC
GTGGGCTTCT ACACCGCCTT CATGCCGCTG TACGTGCTCG GCTTCATGGG CATGACGCGT
CGTCTGAACC ATACCGACAA CCCGGCATGG CAGCCGTGGC TGATCGTTGC CGTGATCGGC
GCCGCGATCA TCGCCTGCGG CATCGCTTCG CAGCTCATCC AGATCTTCGT GAGCGTCCGC
AACCGTCATG CGCTGGCCGA CCTGACGGGC GATCCGTGGG GCGGTCGCAC GCTGGAGTGG
GCGACGTCGT CGCCGCCGGC GCACTACAAC TTCGCCCGCG TGCCGGTCAT CCGTGACATC
GACGCCTTTG CCGACATGAA GGCGCGCGGC GAGGTGCTGA CGCAGGTCGC ACCGAGCTAC
GAAAAGATCC ACATGCCGAA GAACACCGGC GCCGGCTTCT TCATCGGCAT GTTCTCGATC
GTGATGGGCT TCGCGCTGAT CTGGCACATC TGGTGGATGG CCGTGCTGGG TCTGGTCGGC
ATGATCGGCA GCTTCATCCT CCGCAGCAAC AACGACGACA TCGATTACTA CGTGCCCGCT
CACGAGGTTC ACGAGACCGA GTCGGCCTAC TTCCAACGTA TCGGTTCGCA GGCTTAA
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| Protein sequence | MFGKLSLEAI PLHEPIVVVT VSAILLGGAG LFGLITYLKK WTYLWNEWIT SVDHKKIGVM
YCILAIVMLL RGFADAIMMR SQLAVASGGG AGYLPPEHYD QIFTAHGVIM IFFMAMPLMT
GLINLIVPLQ IGARDVAFPF LNTLSFWLAA AGVVLINVSL GVGEFARTGW LAYPPLSELA
YSPGVGVDYY IWALQISGLG TLLTGVNFVA TIFKMRAPGM TLMRMPIFTW TALCANILIV
AAFPVLTVAL ALLGADRYLD MHFFTNGGGN AMLYVNLIWI WGHPEVYILI LPAFGMFSEI
VSTFSRKKLF GYTSMVWATA GITVLSFLVW LHHFFTMGSG ANVNAFFGIA TMIISIPTGV
KIFNWLFTMY RGRVELNSMM LWTIGFMITF VIGGMTGVLL AVPGADFLLH NSLFLIAHFH
NTIIGGVVFG YLAGITYWFP KAFGFKLDEK WGKRAFWCWF VGFYTAFMPL YVLGFMGMTR
RLNHTDNPAW QPWLIVAVIG AAIIACGIAS QLIQIFVSVR NRHALADLTG DPWGGRTLEW
ATSSPPAHYN FARVPVIRDI DAFADMKARG EVLTQVAPSY EKIHMPKNTG AGFFIGMFSI
VMGFALIWHI WWMAVLGLVG MIGSFILRSN NDDIDYYVPA HEVHETESAY FQRIGSQA
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