| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3149 |
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| Symbol | |
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| ID | 6288694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3299425 |
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| End bp | 3301122 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642626724 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001900703 |
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| Protein GI | 187930216 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0475182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0238901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAT TGATTGGCAA CGATCAATCT GCGCTCTCCG GCGCACCACT TAGCTGGACG
ACCATCAACT GGCGTCGAGT CGAGCGGAAC GTCCGGGCAA TGCAGATACG AATTGCGAAG
GCAACACAGG AAGAGGATTG GCGCCGGGTG AAAGCCCTGC AACGGTCCTT GACCCGCTCG
TTCAGCGCGA AAGCGCTGGC AGTACGACGA GTGACGGAGA ACCAAGGCAA GCGAACGGCA
GGCGTCGATC GCGAGCTGTG GGACTCGCCT GAAGTCCGGT GGGCAGCCAT CGGGCGGTTG
AAACGCCGTG GGTATCGTCC CCTGCCATTA CGGCGGGTCT ATATCCCCAA GGCCAATGGG
AAGGAGCGCC CACTAGGCAT TCCGACCATG TTGGACCGAG CCATGCAGGC TCTATACCTG
CTGGCGCTGG AACCGGTGTC CGAAGGGACG AGCGATCCGA ACTCGTATGG GTTCCGGATC
AATCGGTCCA CTGCAGACGC CATGTCTCAG CTATTCGTTT CCCTCTCGCA GAAGGCTTCG
GCCCAATGGG TGCTGGAGGC GGATATCAAA GGCTGTTTTG ACCATATCGA CCACGACTGG
CTGGAAAGCA ATGTCCCGAT GGACAAAGCG ATCCTCCGGA AGTGGTTGAA GGCTGGCGTG
GTATTTCAAG GCCAGTTTCA GGCGACCGAG GCTGGAACGC CGCAAGGGGG CATCATTTCC
CCGACATTGG CGAACGTGGC ATTGAATGGT CTGGAAAACC AACTGCTCGC GCATTTGAAG
GCGAAGCTGG GGGTGGTCAA GACCAAGAAG CTGAAAGTGA ACGTGGTACG GTACGCAGAC
GATTTCGTCA TCACCGGCAG TACGCCGGAC CTGTTGGAGG ATGAGATCAA ACCGTGGGTG
GAGCAGTTCC TTGCTGTACG GGGACTGTCG CTATCCACGG AGAAAACGCG GATCATCAAC
ATCGCAGAAG GCTTCGACTT CCTTGGGTGG AATTTCCGGA AGTACTCGGG AAAGCTGCTT
ATCAAGCCAA GCAAGAAGAA CGCGCAAGCG TTCTACCGCA AGGTGAAGGA GGTCATCAGT
GCCAACAAGA CGGCGAAGCA GGAGAGCTTG ATCCGACTGC TGAACCCGAT CCTGCGGGGC
TGGGCGCGGT ATCACCACCC CGTGGTAGCC AAGGCGACGT TCAGCCGCAT GGAGCACGAG
ATTTTCCGGG CTCTGCTGCG GTGGGCTAAA CGGCGGCACT CCAACAAGTC CGTCGACTGG
GTGCGGAAGA AGTATTTCGC ACCGATCGAA GGACGGAGTT GGGTGTTTGG AACCGCGGTA
GTGAGAGACG ATGGCAGCAG GCAATGGACG GAGTTGTACT CTCTTGCGAG CACGTCCATT
AGGCGCCACA AGAAAATCAA GGGGGCTTAC AACCCCTTTG ATCCAGCTTG GGAAATGGAG
GGTGAAACAT TGCGTCAGGC GCGACTGCTG CAAAGCATGT CGCACCGGAA ACAGTGGATC
AAACTGTATG TTGACCAGCG GGGCTTGTGT GCGTTGTGTC AGTGCAAGAT GACCAAGGAA
ACAGGGTGGC ATGACCATCA CATCGAGTAC CGCGTACACG GCGGCTCGAA CGTCCTCGGA
AATCGCGTGC TGTTGCACCC GAGCTGTCAT GCGCAAGTGC ATGCCAATGG CTTCAAGGTT
GTGAAGCCGG CCTTATAA
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| Protein sequence | MEILIGNDQS ALSGAPLSWT TINWRRVERN VRAMQIRIAK ATQEEDWRRV KALQRSLTRS
FSAKALAVRR VTENQGKRTA GVDRELWDSP EVRWAAIGRL KRRGYRPLPL RRVYIPKANG
KERPLGIPTM LDRAMQALYL LALEPVSEGT SDPNSYGFRI NRSTADAMSQ LFVSLSQKAS
AQWVLEADIK GCFDHIDHDW LESNVPMDKA ILRKWLKAGV VFQGQFQATE AGTPQGGIIS
PTLANVALNG LENQLLAHLK AKLGVVKTKK LKVNVVRYAD DFVITGSTPD LLEDEIKPWV
EQFLAVRGLS LSTEKTRIIN IAEGFDFLGW NFRKYSGKLL IKPSKKNAQA FYRKVKEVIS
ANKTAKQESL IRLLNPILRG WARYHHPVVA KATFSRMEHE IFRALLRWAK RRHSNKSVDW
VRKKYFAPIE GRSWVFGTAV VRDDGSRQWT ELYSLASTSI RRHKKIKGAY NPFDPAWEME
GETLRQARLL QSMSHRKQWI KLYVDQRGLC ALCQCKMTKE TGWHDHHIEY RVHGGSNVLG
NRVLLHPSCH AQVHANGFKV VKPAL
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