Gene Rpic_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3145 
SymbolhemA 
ID6288603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3294275 
End bp3295582 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID642626720 
Productglutamyl-tRNA reductase 
Protein accessionYP_001900699 
Protein GI187930212 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0225946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTGC TGACGCTCGG AATCAACCAC CACACTGCGC CGCTTTCCCT GCGCGAGAAG 
GTGGCGTTTC CGCTCGAGCA GCTCAAGCCC GCGCTGGGCA CGCTGCGCCA GCATCTGCCC
CACCTCAGAA GCACGGCAGA AGCCGCCATT CTCTCCACCT GCAATCGCAC CGAAATCTAC
TGCGCCACCG ACGGCAACCT GCCTGAACAG ACCGCGCACG AACATGCCAT TCGCTGGCTG
GCGCAGCACC ACAACATCGA CGCCGGCGAA CTTGCGCCCC ATGTGTATTC GCTCGGCCAG
TCGCTGGCCG TACGCCACGC ATTTCGCGTG GCCAGCGGGC TCGATTCGAT GGTGCTGGGC
GAGACCCAGA TCCTCGGGCA GATGAAAGAC GCCGTGCGCA CCGCCACCGA GGCGGGCGCC
TTGGGCACGT ACCTGAATCA GCTGTTCCAG CGCACCTTTG CCGTGGCCAA GGAAGTGCGC
GGCACGACAG AGATCGGCGC GCATTCCGTG TCGATGGCCG CCGCCGCCGT TCGCCTGGCG
CAGCGCATCT TTGAGTCGAT CGCTGATCAG CGCGTCCTGT TCATCGGCGC CGGCGAGATG
ATCGAGCTGT GCGCCACCCA CTTCGCCGCG CAGACGCCGC GCGAAGTGGT GATCGCCAAC
CGCACGCTGG AACGCGGCGA GAAGCTGGCC GAATCGCTGT CGAACCAGGG CCTGAACGCC
CGCGCCGTGC GTCTGGCCGA ACTGCCGACC AAGCTTGCCG AGTTCGACAT CGTTGTCTCG
TGCACCGCCA GCACGCTGCC CATCATCGGC CTGGGCGCCG TTGAGCGCGC CATCAAGCAG
CGCCGCCACC GCCCAATGTT CATGGTCGAC CTGGCGGTGC CGCGCGACAT CGAACCCGAA
GTCGCACGTC TGTCCGACGT GTTCCTCTAC ACCGTGGACG ACCTGGGCGC TATCGTGCGC
GAAGGCAACG CGCTGCGGCA GGCCGCCGTG GCGCAGGCCG AGGCCATCAT CGAAACGCGC
GTGCTGAACT TCATGCACTG GCTCGATGCG CGCAGCGTGG TGCCGATCAT TCGCGATCTG
CACGCCCAGG CTGAAACGCT GCGCCAAGGT GAACTGGAAC GCGCCCAGCG CATGCTCGCC
CGCGGCGACG ATCCGGCGCT GGTGCTCGAA GCGCTGTCTC AGGCGCTCAC CAAGAAATTC
CTCCACGGCC CGACGCATGC GCTCAACCAC GCGCAGGGCG AAGGCCGCGA ACAGCTCATC
GACCTGCTGC CGGCGCTATT CCGCCAGTCC AGCCACTCCG AGCGCTAG
 
Protein sequence
MQLLTLGINH HTAPLSLREK VAFPLEQLKP ALGTLRQHLP HLRSTAEAAI LSTCNRTEIY 
CATDGNLPEQ TAHEHAIRWL AQHHNIDAGE LAPHVYSLGQ SLAVRHAFRV ASGLDSMVLG
ETQILGQMKD AVRTATEAGA LGTYLNQLFQ RTFAVAKEVR GTTEIGAHSV SMAAAAVRLA
QRIFESIADQ RVLFIGAGEM IELCATHFAA QTPREVVIAN RTLERGEKLA ESLSNQGLNA
RAVRLAELPT KLAEFDIVVS CTASTLPIIG LGAVERAIKQ RRHRPMFMVD LAVPRDIEPE
VARLSDVFLY TVDDLGAIVR EGNALRQAAV AQAEAIIETR VLNFMHWLDA RSVVPIIRDL
HAQAETLRQG ELERAQRMLA RGDDPALVLE ALSQALTKKF LHGPTHALNH AQGEGREQLI
DLLPALFRQS SHSER