| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3141 |
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| Symbol | |
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| ID | 6286060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3289015 |
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| End bp | 3291303 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642626716 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001900695 |
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| Protein GI | 187930208 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.583701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.345899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGC AATCGCCTCC GCCCTTGTCT GCAATTGACG ACATCGACGC CTCGACCGGT
ATCGGCAGCA ACGCTGCCAT CCAGTCGCGC GGGGTGTTGC TGTGCCTGTC CGAACCCGAT
CTGCGCATCC ATCAGGTGAG TGAAAACCTG GAGGCCGCGC TGGGTACGCC ACTGGCCACC
GCGCTGCAGG CGCCTGTTGA CCATGTCATC GGCACGGCGG GGCGCGAGGT GCTGGAGCGC
GCCCTGGGCA CGCACAGCAT CGACGGACAC CCCTTGTATA TCGGCACACT CCTGACGCCG
CACGGGCACG CACTCGACGC GGTGGTGCAT CGGCACAAGG GCACGCTCAT CCTGGAGGTG
GAACCCGCCA TGCATGCGGC CGACGGCGCG TTTGCGTCGA TGTATCCGCT GGTGCGCACC
TTTGTCGCCA GCCTGCAAGC CGTAGGCACG ATCGATGCGC TGACGGACCT CGCCGCGCGC
GAAGTCCACC ACCTCACCCA CTTTGGCCGC GTCACGATCT ACCGCATTGA GCGCGATGGC
TCCTTGCAAG CGCTCGCTGA AGCGCGCAAC GAGGCCTATG ACACGCTGGT CGGTACGCAC
CTGTCTGGCG CCGGCATAAC GCCCGAACTG CGCAATCTGT ATAGCCACAA CCCCTTGCGC
CTGGTGGCAG ACGTCGACGA CACGCCGGTG GGGCTGGTGC CCCCGCTGCA TCCGTCCACC
GGGCGGACGA CCGATCTGAC CTACGCGGCC TTGCGCGCGG CTTCCGATGC GCAGCGCGAA
ACCATGCGCC GCATGGGCGC GAAGGCGTCG CTCACGCTGG CGCTTACGGT GCGCGGGAAC
CTGTGGGGCT TGATCGCCCG CCACCATGCG ACGCCCTGTT CGTTGTCGTT TGAAGTGCGC
ACGGCATGCG AACACCTGGC GCAGATTCTG TCGCTGCAGA TCGAAGCGAA GGAAGATCGC
GCCGAGATCG CCCACCGGCT GGAACTGCGA CGCATCCTTG TGCGCCTGCT GGCCGCGATG
GCCGACCGTG ACCATTTCCA CGAAGGCCTG CTCGAACATC CCGCCGATCT GCTGCGCTTT
GCCTCGGCCA GCGGCGCCGC CATCGTTCGC CAGGGCGAGT GCGTGCGCAT CGGTGCCGCG
CCTGACGAAG CCAGCATCCT GCGCCTGACC GAATGGCTGG CCAATGCGCA CCCCGGGGAG
GTCTTCCACA CCGACCGTGT GGCCGCCACC TACCCGGACA GCGCAGCGCT GCTGCCCCAG
GCCAGTGGCG TGCTGGCCGT GCAGGTTTCG CAACTGCATC GCCACTACGT GCTGTGGTTC
CGCCCCGAAA CCCCGCACAC CGTGCGCTGG GCGGGCGACG CACCGGACGC GGCCATCGCC
CACGACAGCC AGCACGTGCT GGGCCGCACC CGCCATTGGC AGGAGCGCAT CGCGCACACT
TCGCGCCCGT GGCGCACAAG CGAAGTGGAA ACCGCCGCGG AGTTCCGCTA CGCCGTCCTG
AACATCGTGC TGCGCCGCGC GGAAGAAGCC GCGGAGTTGG CCAGCGAACT GCGCCGCGCC
AACCACGAAC TGGAAGCGTT TTCGTATTCC GTATCGCACG ACTTGCGCGC GCCGCTGCGC
CACATCGCCG GCTATGCCGA ACTACTGGAC GAGATGGAGG GCCAGCACGT CTCGGCACGC
GGGCGGCACT TTCTGCAGAC GATCTCAGAG TCGTCGCGCT TTGCGGGCAA GCTGGTCGAC
GATCTGCTGA CCTTTTCGCA GATGGGCCGC GGCGCGCTTC ATCTGACCGA CGTCGATCTC
GCACAGCTCG TGCGCGGCGT CGTGCGCGAT CTGACGCCAG ATCAGGGACG TCGCCATATT
GAATGGGACA TCGCCACCTT GCCGGTGGTG CGCGCCGACC CGGCATTCCT GCAACTGGCG
ATGCGCAACC TGCTCTCCAA CGCAGTCAAA TACACGCGCG GCCGTGACCC GGCGCGCATC
CATATCGACG CCGAACAGAC CGACGCCGAA ACCATCGTGC GCATTGCCGA CAACGGCGTG
GGCTTCTCGA TGGAATACGT GGCCAAGCTG TTCGGCGTGT TCCAGCGGCT GCATCGCATG
GACGAGTTCG AGGGCACCGG CATCGGCCTG GCTAATGTGC GGCGCATCAT CGATCGCCAC
GGCGGCCGCA CCTGGGCCGA GGGCGAGCTT GATCGCGGCG CGACGTTCTA CTTCGCGCTG
CCGCGCACGC CGGACCCGCA GGCGGCATCC GCAGCGGGCC TCCGCACACC CGTGACTCGC
GATGCCTGA
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| Protein sequence | MSSQSPPPLS AIDDIDASTG IGSNAAIQSR GVLLCLSEPD LRIHQVSENL EAALGTPLAT
ALQAPVDHVI GTAGREVLER ALGTHSIDGH PLYIGTLLTP HGHALDAVVH RHKGTLILEV
EPAMHAADGA FASMYPLVRT FVASLQAVGT IDALTDLAAR EVHHLTHFGR VTIYRIERDG
SLQALAEARN EAYDTLVGTH LSGAGITPEL RNLYSHNPLR LVADVDDTPV GLVPPLHPST
GRTTDLTYAA LRAASDAQRE TMRRMGAKAS LTLALTVRGN LWGLIARHHA TPCSLSFEVR
TACEHLAQIL SLQIEAKEDR AEIAHRLELR RILVRLLAAM ADRDHFHEGL LEHPADLLRF
ASASGAAIVR QGECVRIGAA PDEASILRLT EWLANAHPGE VFHTDRVAAT YPDSAALLPQ
ASGVLAVQVS QLHRHYVLWF RPETPHTVRW AGDAPDAAIA HDSQHVLGRT RHWQERIAHT
SRPWRTSEVE TAAEFRYAVL NIVLRRAEEA AELASELRRA NHELEAFSYS VSHDLRAPLR
HIAGYAELLD EMEGQHVSAR GRHFLQTISE SSRFAGKLVD DLLTFSQMGR GALHLTDVDL
AQLVRGVVRD LTPDQGRRHI EWDIATLPVV RADPAFLQLA MRNLLSNAVK YTRGRDPARI
HIDAEQTDAE TIVRIADNGV GFSMEYVAKL FGVFQRLHRM DEFEGTGIGL ANVRRIIDRH
GGRTWAEGEL DRGATFYFAL PRTPDPQAAS AAGLRTPVTR DA
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