| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3132 |
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| Symbol | |
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| ID | 6286687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3280046 |
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| End bp | 3281917 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642626707 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_001900686 |
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| Protein GI | 187930199 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.831871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA TGAAGCCGAT CCGCTACACC ATTGCCCCCG CCGCGCCCGA GGCGCACGTT
TTCACCGTCA CCGTCACGGT TGACGCGCCC GACAGCCAAG GCCAGCGCTT TTCGCTGCCG
GCGTGGATTC CGGGCAGCTA CATGATCCGC GAGTTCGCGC GCAACATCGT GCGGATCGAG
GCATCGTCGG CGGACAGGCC GGTGCGCCTG TCCAAGGTCG ACAAGCACAC GTGGTGGGCC
GCCCCGTGCA CCGGGCCGCT GACGGTTTCA TACGACGTCT ATGCGTGGGA CTTGTCGGTG
CGCGCCGCGC ACCTGGACGC CACGCGCGGC TTCTTCAATG GCACGTCGGT ATTCCTGCGT
GTGGAAGGCG CGGATGACCA GCGTTGCCTG GTCGACATCC AGCCGCCGGC CGGAGAGGCC
TACCGCGGCT GGCGCGTGGC GACCGCGCTG CGCGAGGCCA CTGGACGCGT CCAGGGCAAG
GCTGGCGCCA AGCGCCACGG CTTCGGCTGG TACGAAGCAG CGGACTACGA CGAACTGATC
GACCACCCGG TTGAGATGGG CACGTTCGAG CTGGTGTCGT TCGAGGCCTG CGGCGCGCAG
CACGACGCCG TCTTTACCGG CCGCGTACCG AATCTCGATC TGGAACGCAT CGCCCGCGAT
TTCAAGCGCA TCTGCGAAGC GCAGATCCGC CTGTTCGAGC CGCACACCGC CACGGCGCCG
TTCCTCGACA GCAACCGCCG CTACGTCTTC ATGACGATGG TCACCACCGA CGGCTACGGC
GGCCTCGAGC ATCGCGCCAG CACCGCGCTG ATGTGCGCGC GCGGCGATTT GCCCGTAGCC
GGCCGCGATG AGACCACCGA GGGCTATCGC ACCTTCCTTG GCCTCGTTAG CCACGAGTAT
TTCCACACCT GGAACGTCAA GCGCATCAAG CCGGCCACCT TCGTGCCGTA CGCGCTCGAC
CGCGAGGTCC ACACACCGTT GCTGTGGCTG TTTGAAGGGT TCACCAGCTA TTACGACGAC
CTGATGCTGG TGCGCTCGGG CCTGATCTCC GAAGCGCAAT ATCTGGAGAT GCTCGGCAAG
ACATGGAACG GCGTGCTGCG CGGCAGCGGC CGCCTCAAGC AGAGCGTGGC AGAAAGCTCG
TTCGACGCCT GGACGAAGTA CTACCGCCAG GACGAGAACG CCCCCAACGC CATCGTCAGC
TATTACACCA AGGGCTCGCT GGTGGCGCTG GCGCTGGACC TCACGATCCG CACGCAGACC
CACGGCGAAC GTTCGCTCGA TGACGTGATG CGCGCTCTGT GGGTGACGTA CGGCCGCGAT
TTCTACGCCG CCGGCCACGC GCAGCGCGGC GTGACCGAAG CGGGGCTCAT CACCCTGATG
GAAGAAACCA CCGGTGTGCG CCTGCGCACG CTGGTGCGCC AGTTGAGCGA AGGCCGCGAC
GACCCACCGC TGCCTGCGCT CTTCAAGGCG ATGGGCGTGA GCGCCACGCG CAAGGCCGCC
GATACGGCGC TCGCGCTGGG CGTCAAGACC GCCGCCGAGA ACGGCTTCGT CAAGCTGCAG
CAGGTCTTCG ACGGCAGCCC GGCGCAGCGC GCCGGATTGT CTGCCGGCGA TCTGATCGTC
GCGGTGGACG GCCTGCGTGT TCCGGCCGGC CAGCTCGACA AGACGCTCAC GCGCTATCGC
GCCGGCGATA CCGTGCCGGT GCACGTGTTC CGCCGCGACG AACTGATGAC GCTGAAGGTA
ACGCTCGCCG CCGATGCGAC GCCGCAGTTC ACGCTGGCGC TGGCAGCAGA GCCCTCGCCG
CTGCGCTCGG CCTGGCTGGG CAAACGGGCA GCGGCGCGCA GCACGCGCGC GTCACGCGGC
AAGTCAGCCT GA
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| Protein sequence | MSAMKPIRYT IAPAAPEAHV FTVTVTVDAP DSQGQRFSLP AWIPGSYMIR EFARNIVRIE
ASSADRPVRL SKVDKHTWWA APCTGPLTVS YDVYAWDLSV RAAHLDATRG FFNGTSVFLR
VEGADDQRCL VDIQPPAGEA YRGWRVATAL REATGRVQGK AGAKRHGFGW YEAADYDELI
DHPVEMGTFE LVSFEACGAQ HDAVFTGRVP NLDLERIARD FKRICEAQIR LFEPHTATAP
FLDSNRRYVF MTMVTTDGYG GLEHRASTAL MCARGDLPVA GRDETTEGYR TFLGLVSHEY
FHTWNVKRIK PATFVPYALD REVHTPLLWL FEGFTSYYDD LMLVRSGLIS EAQYLEMLGK
TWNGVLRGSG RLKQSVAESS FDAWTKYYRQ DENAPNAIVS YYTKGSLVAL ALDLTIRTQT
HGERSLDDVM RALWVTYGRD FYAAGHAQRG VTEAGLITLM EETTGVRLRT LVRQLSEGRD
DPPLPALFKA MGVSATRKAA DTALALGVKT AAENGFVKLQ QVFDGSPAQR AGLSAGDLIV
AVDGLRVPAG QLDKTLTRYR AGDTVPVHVF RRDELMTLKV TLAADATPQF TLALAAEPSP
LRSAWLGKRA AARSTRASRG KSA
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