Gene Rpic_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3129 
Symbol 
ID6286108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3276672 
End bp3277463 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID642626705 
Producturacil-DNA glycosylase 
Protein accessionYP_001900684 
Protein GI187930197 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.532075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAC GCGCCAATCC GGCGCAAGCC GCCCTCTTCG ATGAACCCGC GGTGGACGCG 
GCCGACGTGA GTTTCATCCC GCTGGCCCAG CAGTTCGACG CCCTCCCCGC CGACTGGAAG
GCGGTCCTCA CGCCCTGCAT CGCGCAGACC AATTGGCCTG AACTATGTGC CTTTGTCGAT
GGCGAGCGCG CAGCGGGCAA GCCGATCTTC CCGACGGATG TCTTCCGCGC GCTGCACCTG
ACTTCGGTGG ACGATGTACG CGTCGTCATC CTCGGCCAGG ACCCGTATCA CGGCACAGGC
ACCGTGGATG GCCGCGAGAT TCCGCAGGCG CATGGGCTGG CGTTTTCAGT GCCGGCGGGT
GTGCGCGTGC CGCCAAGCCT GCGCAACATC TACAAGGAAA TCGAAGCGGA GTTCGGCTGC
AAGCTGCCAG GCACCTCCGG CAACCTGGAG GGCTGGGCAC AGCAAGGCGT GCTGCTGCTG
AACACGGTGC TCACCGTCGA ACAAGGCCAG GCTGCGAGCC ACGCCAAGCG CGGCTGGGAG
CGCATCACCG ATTGCCTGCT GGAGCAACTC GCACGCGTCG GCCACAAGCG CGTGTTCATG
CTGTGGGGCA GCCACGCGCA GGCCAAGCGC GCGCTGCTGT CGGACGGGCA TCTGGTGCTG
GAGGCGCCGC ACCCGTCGCC GCTGTCGGCG CATCGCGGGT TCTTGGGATG CGGGCATTTC
AAGACGGCGA ATGATTGGCT GGCGGCGCAG CGCCAACCGA CCATCGACTG GCTGAAACCG
CAGGCCGCTT GA
 
Protein sequence
MTRRANPAQA ALFDEPAVDA ADVSFIPLAQ QFDALPADWK AVLTPCIAQT NWPELCAFVD 
GERAAGKPIF PTDVFRALHL TSVDDVRVVI LGQDPYHGTG TVDGREIPQA HGLAFSVPAG
VRVPPSLRNI YKEIEAEFGC KLPGTSGNLE GWAQQGVLLL NTVLTVEQGQ AASHAKRGWE
RITDCLLEQL ARVGHKRVFM LWGSHAQAKR ALLSDGHLVL EAPHPSPLSA HRGFLGCGHF
KTANDWLAAQ RQPTIDWLKP QAA