Gene Rpic_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3128 
Symbol 
ID6286107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3276016 
End bp3276675 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID642626704 
Productadenylate cyclase 
Protein accessionYP_001900683 
Protein GI187930196 
COG category[S] Function unknown 
COG ID[COG3025] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.352745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.54028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG AGATTGAACT GAAGCTGGCC GTATCGGCCG GCGCGCACGA CGCACTGGTC 
GGCTGGCTGG ACGCCAATGC GCAGGCGGCC GGCTCGGTGG AATTGGCGAA CGTCTACTAC
GACACGCGCG ACCAGGCGCT GGCGCGCAAC CGCGCCGCGC TGCGCGTGCG CCGTCAGGGC
AGTCAATGGC TGCAGACGCT GAAGACCGCA GCAGTGAGTA CGTCCGGTTT GAGCGCCCGC
CACGAATGGG AGGTGCCGCT GCAGAACGAT GCACTGTCCG TCGATGCCTT CGTCGCCAAC
AACGCCGCCG AAGCCGCCGA CTATGTTCGG CCACACGCCG CTGCGCTCGC CCCGCTGTTC
CGCACCGACT TCACGCGCCG CCTGTGGCAC GTGGGTGCCG AGGGCGGCGA GATCGAGATT
GCACTGGACG CCGGCGCCAT CCTCATCCCC GGCACGCAGG CGCGCGAGCC GATCGACGAA
CTGGAACTGG AGTGGAAACC GGCAGACGAC AGCACGCTCG GCGAAGACGC GATTGCAGAG
CGCCTGCACG CCTGGACGCA AACGCTGCGT GCCGCCGTGC CGGGCCTCAC GCCGCTCGAC
ATCAGCAAGG CGCAACGCGG CTACCAGTTG CGCGAGAAAG CCGTCGGGGG CCAGACATGA
 
Protein sequence
MAREIELKLA VSAGAHDALV GWLDANAQAA GSVELANVYY DTRDQALARN RAALRVRRQG 
SQWLQTLKTA AVSTSGLSAR HEWEVPLQND ALSVDAFVAN NAAEAADYVR PHAAALAPLF
RTDFTRRLWH VGAEGGEIEI ALDAGAILIP GTQAREPIDE LELEWKPADD STLGEDAIAE
RLHAWTQTLR AAVPGLTPLD ISKAQRGYQL REKAVGGQT