| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3122 |
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| Symbol | |
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| ID | 6288386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3270465 |
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| End bp | 3271211 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626698 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001900677 |
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| Protein GI | 187930190 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.571446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.270174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGG GCGTGCTACC CGCCGGCCCC GTCCGCGCTG TCATCATCGA CCTAGACGGG
ACGATGGTCG ACACGGCGGG CGACTTCCAC GCCGCCATCA ATGCGATGCT GGGGGCGCTT
GGCGCCGCGC CGGACATGCC AGCCGAGGAA GTGGTCAGTT ACGTCGGCAA AGGCTCGGAA
AACCTCGTGC GGCGCGCGCT TGATGCACGC TTGCCGCCCG CCCAGGCCAA CAGCCGCTTT
GCGGAGGGGC TGGAGTTGTA CCAGCGCGCC TACATCGCCA TCAACGGACA GCACGTGAAC
GTCTATGACG GCGTGCGCGA AGGGCTGGCT GCACTGCGCG ACATGGGCAT CGCTCTCGCG
TGCGTGACGA ATAAGCCACG CGATTTCACG CAGCCGCTCC TGGCGCAGCT CGGCCTGAAC
ACGTATTTCG ACCTCGTCTA CCCGGGCGAC GCCTTCCAGT ATCGCAAGCC CGATCCGTAC
CCCATGCTGC GGGTGGCGGA GGCGTTTGGC GTGGCCCCGG TTGAAATCGT GGCCATTGGC
GACTCGGAAA ACGACGCCCG CGCGGCCCGT GCCGCCGGCA TGCGCGTGCT GGCGGTACCG
TATGGCTATA ACCACGGCCA GCCTATACAG GGCGCCGGGG CCGATGCTAT AGTCGACACA
CTTTTTGCGG CAGCCGAGTT GATCCGGCCC TATGCGGAGC CACACAACGC CGTCTCTGCC
GCTTCAACTG ACGATCCATG TTCCTGA
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| Protein sequence | MMTGVLPAGP VRAVIIDLDG TMVDTAGDFH AAINAMLGAL GAAPDMPAEE VVSYVGKGSE
NLVRRALDAR LPPAQANSRF AEGLELYQRA YIAINGQHVN VYDGVREGLA ALRDMGIALA
CVTNKPRDFT QPLLAQLGLN TYFDLVYPGD AFQYRKPDPY PMLRVAEAFG VAPVEIVAIG
DSENDARAAR AAGMRVLAVP YGYNHGQPIQ GAGADAIVDT LFAAAELIRP YAEPHNAVSA
ASTDDPCS
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