| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3121 |
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| Symbol | |
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| ID | 6288942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3269743 |
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| End bp | 3270468 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626697 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001900676 |
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| Protein GI | 187930189 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.798582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.13274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCAG CCATCGATCC GTCCGGTTTC CGCATCGCCC CGTCCATCCT CTCCGCCGAC
TTTGCCCGCC TGGGCGAAGA AGTGCGCCGC GTGCTCGAAT CGGGCGCGGA CTGGATCCAC
TTCGATGTGA TGGACAACCA CTACGTGCCG AACCTGACCG TCGGGCCGCT GGTTTGCGAG
GCGATCCGCC CGCACGCACA AAAGGACGGC AAGCCGGTGC CGATCGACGT GCATCTGATG
GTCAGCCCGG TCGATCGCAT CATCCCGGAC TTCGCAAAGG CCGGCGCCGA CCTGATCACC
TTCCACCCGG AAGCGTCCGA GCACATCGAC CGCTCGCTGG CGCTGATCCG CGACAACGGC
TGCAAGGCCG GCCTGGTGTT CAATCCGGCC ACCCCGCTGC ACTACCTGGA CCATGTAATG
GACCGCCTGG ACATGGTGCT GATCATGTCG GTCAACCCCG GCTTTGGCGG CCAATCGTTC
ATTCCGGAAG CGCTGAACAA GCTGCGTGCC GTGCGCCAAA AGCTCGACGC ATACCAGGAC
AAGACCGGCC GCAAGATCCT CCTTGAGATC GACGGCGGCG TGAAGGCAGA CAACATTGCC
GAGATTGCCA AGGCCGGCGC AGACACCTTC GTCGCGGGTT CGGCCGTGTT CGGCAAGCCG
GACGCGGATG GCGGCTACCG CGGCACCGTG GGCGCGCTGC GCCAAGCGCT GGCCCCCCTG
GCATGA
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| Protein sequence | MSAAIDPSGF RIAPSILSAD FARLGEEVRR VLESGADWIH FDVMDNHYVP NLTVGPLVCE
AIRPHAQKDG KPVPIDVHLM VSPVDRIIPD FAKAGADLIT FHPEASEHID RSLALIRDNG
CKAGLVFNPA TPLHYLDHVM DRLDMVLIMS VNPGFGGQSF IPEALNKLRA VRQKLDAYQD
KTGRKILLEI DGGVKADNIA EIAKAGADTF VAGSAVFGKP DADGGYRGTV GALRQALAPL
A
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