| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3114 |
|---|
| Symbol | |
|---|
| ID | 6288433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3264124 |
|---|
| End bp | 3264900 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642626690 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001900669 |
|---|
| Protein GI | 187930182 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000516225 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.042562 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTACG AAAACATTCT GGTCGAAACG CGCGGTCGCG TCGGTCTCAT TACGCTCAAT
CGTCCGAAGG CACTCAACGC CCTCAACGAT GCGCTCATGG ACGAACTCGG TGGCGCGTTG
CTCGCCTTCG ATGCCGACGC CAACATTGGC GCCATCGTCA TTACCGGCAG TGAAAAGGCG
TTCGCCGCCG GCGCGGATAT CGGCGCCATG GCCGATTACG ACTTCGCTAC CGTCTACAAG
AACGAATACA TCACGCGCAA CTGGGAAACC ATTCGCCGCA TCCGCAAGCC GGTGATCGCC
GCGGTGGCCG GCTACGCGCT CGGTGGCGGC TGTGAACTGG CCATGATGTG CGACATCATC
CTCGCCGCCG ATACCGCCAA GTTCGGCCAG CCGGAAATCA AGCTCGGCAC CATGCCCGGC
GCAGGCGGCA CGCAACGCCT GCCGCGCGCC GTCTCCAAGG CCAAGGCCAT GGACCTCTGC
TTGACTGCCC GCATGATGGG CGCGGAGGAA GCCGAGCGCG CCGGCCTAGT CTCGCGCGTC
ATCCCCGCCG ACAAGCTGCT CGACGAAGCC ATTCAGGCCG CAGAAACCAT TGCCGGCTTC
TCGCTGCCCA CGGTCATGAT GATCAAAGAG TCGATCAACG CGGCCTACGA GACTTCGCTC
AGCGAGGGCG TGCATCTGGA GCGCCGCCTG TTCCACGCCA CATTCGCTAC AGAAGACCAG
AAAGAAGGCA TGCGCGCCTT CGTCGAAAAG CGTGCAGCGG CGTTCAAGCA CCAATAA
|
|---|
| Protein sequence | MSYENILVET RGRVGLITLN RPKALNALND ALMDELGGAL LAFDADANIG AIVITGSEKA
FAAGADIGAM ADYDFATVYK NEYITRNWET IRRIRKPVIA AVAGYALGGG CELAMMCDII
LAADTAKFGQ PEIKLGTMPG AGGTQRLPRA VSKAKAMDLC LTARMMGAEE AERAGLVSRV
IPADKLLDEA IQAAETIAGF SLPTVMMIKE SINAAYETSL SEGVHLERRL FHATFATEDQ
KEGMRAFVEK RAAAFKHQ
|
|---|
| |