| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3106 |
|---|
| Symbol | |
|---|
| ID | 6287951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3245502 |
|---|
| End bp | 3247598 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642626677 |
|---|
| Product | molybdopterin oxidoreductase |
|---|
| Protein accession | YP_001900661 |
|---|
| Protein GI | 187930174 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCC AAGTCATCCG TGCCGCCTGC CCGCACGACT GCCCCGACAC CTGCGCCTTG
CTCGTCACCG TCGAGGACGG CCGCGCCACC CGCGTGCAGG GCGACCCGGA CCACCCGACG
ACTGCCGGCG TGCTGTGCAC CAAGGTCAAT CGGTATGCAG AACGCACGTA CCACCCGAAC
CGTCTGCTGA CGCCGATGAA GCGCGTGGGC GCCAAGGGCG AGGGCAAGTT CGAACCGATC
TCGTGGGGCG AGGCCATCGA CACCATCGCC ACGCGTCTGG GGGACATTGC CGCGCGCAAC
CCGGAGGCCA TCCTCCCGTA CAGCTACGCC GGCACGATGG GCCTGGTGCA GGGGGAAAGC
ATGGCCGCGC GCTTCTTCCA CAAGCTCGGA GCGTCGCTGC TCGATCGCAC GATCTGCGCA
TCGGCCGGGG CAACGGCGCT GCGCTACACG TATGGCGCGA GCCTCGGCAT GGACATCGAG
CACGTGCAGG ACGCCAAGCT GATCCTGATC TGGGGCGCCA ATCCGATCGC ATCGAACCTG
CATTTCTGGA CGCGCGCGCA GGAAGCCAAA CGGCGCGGCG CCACGCTCGT CGCCATCGAT
CCGTATCGCT CGCTGACGGC CGAGAAGTGC CATCGCCATC TGGCGGTGCG CCCTGGTACC
GATGCGGCGC TGGCGCTGGC GATGATCCAC GTGTTGATCC GCGATGACCT GCTCGACCAC
GACTACATCG CCAATCACAC GCTCGGTTTC GAGGCGCTCC GTGAACGCGC ACAGCAATAC
ACGCCGGAAT ATGCGGCGAC GCTGTGTGGG GTGGACGCGG CGGATGTCGA GTGGCTCGCC
AAGCTGTACG GCACGACCGT CGTGCGCGAC AAGCAGCCGG CGGCCATTCG CCTGAACTAC
GGCATGCAGC GCGCGCATGG CGGCGGGCAG GGCGTGCGCG CGGTCGCATG CCTGCCGTCG
CTGGTGGGCG CGTGGCGGGA TGCAGCGGGC GGCCTGCAAC TATCGACGTC CGGTTTCTTC
CCCATCGACA ATGCGAAGCT GCAGCGTCCT GACCTGCTGC CGAGCTGGCC GGCGCTGCCC
CGCACGATCA ACATGAGCAC CATCGGCGAT GCGCTGCTGC ATCCGGGCGA TGCGTCGTTT
GGCCCAAAGG TCGAGGCGGT GGTTGTCTAC AACAGCAACC CCGTGGCGGT GGCGCCGGAT
TCGCGCAAGG TCGCCGCCGG CTTTGCGCGC GAAGACCTCT TCACCGTGGT GCTGGAGCAT
TTCCAGACTG ACACCGCCGA CTACGCCGAC ATCCTCCTGC CCGCCACCAC GCAGCTCGAA
CATGTCGATG TGCACAAGGC GTATGGTCAC ACCTACGTGC TGGCCAACAA CGCTGCCATC
GCGCCCATGG GGCAGTCGTT GCCGAACACG GAGATCTTCC GTCGCATTGC CCGGCGCATG
GGTTTTGACG ACGCCTGCTT TGCCGACTCG GACGACGACA TCGCCAGCCA GGCCGTGCGC
CGTGACGACC CGGCCGCCGC GCACATCGAC TGGGCCACGC TCAAGCGCGA GGGCTGGCAG
AAGCTGGCGC ACCCCGCCGC GCCGCTGGCT CGTGGCGGCT ATCGCACGCC GTCGGGCCGC
TGCGAGTTCT ATTCCGAGCA GATGGCCAAG GACGGCCTTG ACCCGCTGCC CGGCTATGTG
CCGCCGCATG AGTCGGCGAT CAGCACGCCT GAGCTGGCGA AGCGTTATCC GCTGTCGATG
ATCTCGCCGC CGGCGCGCAA CTTCCTGAAC TCGACCTTCG TCAACGTCGA CAGCCTGCGC
AGTACCGAGG GCGAGCCGCA TCTCGATATC CACCCCGACG ACGCGAATGC ACGCGGCGTT
GTCGACGGCG AGCTTGTCCG CATCTTCAAT GATCGCGGCA CCATGCAGGC GCGCGCCCGC
GTGACCGACC GTGCGCGGCG CGGCGTGGTC GTCGGCCTGT CGATCTGGTG GAAGAAGCTC
GCGCCCGACG GCACCAACGC CAACGAGCTG ACCAGCCAGC GCCTGACCGA CATGGGGCGT
GCGCCCACCT TCTACGATTG CCTGGTCGAG GTCGCGCCGT TGGCACAGGC CGCCTGA
|
|---|
| Protein sequence | MSTQVIRAAC PHDCPDTCAL LVTVEDGRAT RVQGDPDHPT TAGVLCTKVN RYAERTYHPN
RLLTPMKRVG AKGEGKFEPI SWGEAIDTIA TRLGDIAARN PEAILPYSYA GTMGLVQGES
MAARFFHKLG ASLLDRTICA SAGATALRYT YGASLGMDIE HVQDAKLILI WGANPIASNL
HFWTRAQEAK RRGATLVAID PYRSLTAEKC HRHLAVRPGT DAALALAMIH VLIRDDLLDH
DYIANHTLGF EALRERAQQY TPEYAATLCG VDAADVEWLA KLYGTTVVRD KQPAAIRLNY
GMQRAHGGGQ GVRAVACLPS LVGAWRDAAG GLQLSTSGFF PIDNAKLQRP DLLPSWPALP
RTINMSTIGD ALLHPGDASF GPKVEAVVVY NSNPVAVAPD SRKVAAGFAR EDLFTVVLEH
FQTDTADYAD ILLPATTQLE HVDVHKAYGH TYVLANNAAI APMGQSLPNT EIFRRIARRM
GFDDACFADS DDDIASQAVR RDDPAAAHID WATLKREGWQ KLAHPAAPLA RGGYRTPSGR
CEFYSEQMAK DGLDPLPGYV PPHESAISTP ELAKRYPLSM ISPPARNFLN STFVNVDSLR
STEGEPHLDI HPDDANARGV VDGELVRIFN DRGTMQARAR VTDRARRGVV VGLSIWWKKL
APDGTNANEL TSQRLTDMGR APTFYDCLVE VAPLAQAA
|
|---|
| |