| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3095 |
|---|
| Symbol | |
|---|
| ID | 6289220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3233718 |
|---|
| End bp | 3235505 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642626666 |
|---|
| Product | Peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_001900650 |
|---|
| Protein GI | 187930163 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG CACGCAAATC CAACGGCACC ACGGCGCGCG CGCGCCTGGG TCAGTTTTCC
GCCAGCCCGG TGCTGGGCCT GCGCCTGCCC ATGTGGCGCT CCAAGCTGGT CGTGTTCCTG
ATGTTCGCGG CGTTCCTGGC ACTGATCGGC CGTGCGCTGT GGATTCAAGG CCCGGGCAAC
CGCTTCTATG AGGCTGAAGG CAAGAAGCGC TTCCAGCGCA CGCTGGAATT GCCGGCCACG
CGCGGCAAGA TTCTCGATCG CAATGGTCTG GTGCTGGCCA CGAGCCTGCC GGTGAAGGCC
ATCTGGGCCG TGCCCGAAGA CGTGCCCAAC AACGTGCCTG GCGAAGACAT GATGAAGCTC
GCCAAGCTGC TGGGCATGAA CAACAAGGAG CTTTCGGGCA AGCTCGGCGA AGACAAGGGC
TTCGTCTACC TCAAGCGTCA AGTGCTGCCG GAGGTGGCCG ACCAGATTGC AGCGCTGAAG
ATCGAAGGCA TCTATCAGAC GCGAGAGTAC AAGCGTTTCT ACCCGGAAGG CGAGGCGATG
GCGCACATCG TCGGTTTCAC CAACGTTGAG GACAAGGGCC AGGAAGGCAT GGAGTTGGCG
CGCGAGTCCG ACCTGGCGGG TGCCGCGGGC CAGCGTCAGG TGATCAAGGA CCGGCTGGGC
CGCGTGGTGG AAGACGTGGG CGTGCTCAAG GCCCCGCGTA ATGGGCATGA CCAGACCCTG
TCGATCGACG CCAAGATCCA GTACCTGACC TTCAACGAAC TGAAAGCCGC CATCGAGCGC
ACCCACGCCA AGGCCGCCAG CGCGATCGTG CTGGATGCCC AGACCGGCGA GGTGCTGGCG
CTCGCGAACT ATCCGACCTA CAACCCGAAC GACCGCAGCC GCCTGTCGGG CGAGCAACTG
CGCAACCGCG TGCTGACCGA CACCTTCGAG CCCGGCTCGA TGATGAAGCC GGTGACGATC
AGCCTGGCGC TGCAGCTCAA GCGCGTGACG CCCAACACGC TGGTGCAGAC CAACGGCAAA
TACAGCTTCG AAGGCGCGAC CATTTCGGAT ACCGGCAACT ACGGAACGCT GACGGTCGCC
CAGGTGATCC AGCACTCCAG CAACATCGGT ACGACCAAGA TCGCGATGAT GCTCAAGCCG
CAGGAAATGT GGGATATGTT CACCAGCGTT GGCTTGGGGC AGGCGCCGAA GATCGGCTTC
CCGGGCGCGG TGGCGGGGCG GCTGCGGCCG GCAAACAAAT GGCGCCGCAT CGAGCAGGCG
ACCATGTCTT ACGGCTACGG TCTGTCGGTG TCGCTGTTCC AGATTGCGCA CGCGTACACC
ATCTTCGCGC ACGATGGCGA GCTGATTCCG ATCACCATGT ACCGCACCGA TGGCCAGCCG
CCGCAGGGCG AGCGCGTAAT CTCGCCGGAG GTGGCGCGCC AGGTCCGTCA GATGCTGGAG
ACGGTGACGG CCCCCGGCGG TACCGCACCG CAGGCCCAGG TAATGGGCTA TCGCGTCGGC
GGCAAGACCG GCACGGCCTG GAAGCACACC GGACGCGGCT ATGACCGCTC CAAGTATCGT
GCCTCGTTCA TTGGCCTGGC GCCGATGTCA AACCCGCGCA TCATCGTGGC CGTGAGCGTG
GACGAGCCTA CGGTGGGTAA CCGCTATGGC GGTGGCGCGG CCGGCCCGGT GTTCTCCCAA
ATCGTGGGCG GTACCCTGCG CGCGTTGAAC GTGCCGCCGG ATTCGCCGGT ACGGCAGCTC
GTGATGACCC CGGATGTGCC GGAAGAACCG GTGGGAGGCC TGCAATGA
|
|---|
| Protein sequence | MSGARKSNGT TARARLGQFS ASPVLGLRLP MWRSKLVVFL MFAAFLALIG RALWIQGPGN
RFYEAEGKKR FQRTLELPAT RGKILDRNGL VLATSLPVKA IWAVPEDVPN NVPGEDMMKL
AKLLGMNNKE LSGKLGEDKG FVYLKRQVLP EVADQIAALK IEGIYQTREY KRFYPEGEAM
AHIVGFTNVE DKGQEGMELA RESDLAGAAG QRQVIKDRLG RVVEDVGVLK APRNGHDQTL
SIDAKIQYLT FNELKAAIER THAKAASAIV LDAQTGEVLA LANYPTYNPN DRSRLSGEQL
RNRVLTDTFE PGSMMKPVTI SLALQLKRVT PNTLVQTNGK YSFEGATISD TGNYGTLTVA
QVIQHSSNIG TTKIAMMLKP QEMWDMFTSV GLGQAPKIGF PGAVAGRLRP ANKWRRIEQA
TMSYGYGLSV SLFQIAHAYT IFAHDGELIP ITMYRTDGQP PQGERVISPE VARQVRQMLE
TVTAPGGTAP QAQVMGYRVG GKTGTAWKHT GRGYDRSKYR ASFIGLAPMS NPRIIVAVSV
DEPTVGNRYG GGAAGPVFSQ IVGGTLRALN VPPDSPVRQL VMTPDVPEEP VGGLQ
|
|---|
| |