Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3095 |
Symbol | |
ID | 6289220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3233718 |
End bp | 3235505 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642626666 |
Product | Peptidoglycan glycosyltransferase |
Protein accession | YP_001900650 |
Protein GI | 187930163 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGCG CACGCAAATC CAACGGCACC ACGGCGCGCG CGCGCCTGGG TCAGTTTTCC GCCAGCCCGG TGCTGGGCCT GCGCCTGCCC ATGTGGCGCT CCAAGCTGGT CGTGTTCCTG ATGTTCGCGG CGTTCCTGGC ACTGATCGGC CGTGCGCTGT GGATTCAAGG CCCGGGCAAC CGCTTCTATG AGGCTGAAGG CAAGAAGCGC TTCCAGCGCA CGCTGGAATT GCCGGCCACG CGCGGCAAGA TTCTCGATCG CAATGGTCTG GTGCTGGCCA CGAGCCTGCC GGTGAAGGCC ATCTGGGCCG TGCCCGAAGA CGTGCCCAAC AACGTGCCTG GCGAAGACAT GATGAAGCTC GCCAAGCTGC TGGGCATGAA CAACAAGGAG CTTTCGGGCA AGCTCGGCGA AGACAAGGGC TTCGTCTACC TCAAGCGTCA AGTGCTGCCG GAGGTGGCCG ACCAGATTGC AGCGCTGAAG ATCGAAGGCA TCTATCAGAC GCGAGAGTAC AAGCGTTTCT ACCCGGAAGG CGAGGCGATG GCGCACATCG TCGGTTTCAC CAACGTTGAG GACAAGGGCC AGGAAGGCAT GGAGTTGGCG CGCGAGTCCG ACCTGGCGGG TGCCGCGGGC CAGCGTCAGG TGATCAAGGA CCGGCTGGGC CGCGTGGTGG AAGACGTGGG CGTGCTCAAG GCCCCGCGTA ATGGGCATGA CCAGACCCTG TCGATCGACG CCAAGATCCA GTACCTGACC TTCAACGAAC TGAAAGCCGC CATCGAGCGC ACCCACGCCA AGGCCGCCAG CGCGATCGTG CTGGATGCCC AGACCGGCGA GGTGCTGGCG CTCGCGAACT ATCCGACCTA CAACCCGAAC GACCGCAGCC GCCTGTCGGG CGAGCAACTG CGCAACCGCG TGCTGACCGA CACCTTCGAG CCCGGCTCGA TGATGAAGCC GGTGACGATC AGCCTGGCGC TGCAGCTCAA GCGCGTGACG CCCAACACGC TGGTGCAGAC CAACGGCAAA TACAGCTTCG AAGGCGCGAC CATTTCGGAT ACCGGCAACT ACGGAACGCT GACGGTCGCC CAGGTGATCC AGCACTCCAG CAACATCGGT ACGACCAAGA TCGCGATGAT GCTCAAGCCG CAGGAAATGT GGGATATGTT CACCAGCGTT GGCTTGGGGC AGGCGCCGAA GATCGGCTTC CCGGGCGCGG TGGCGGGGCG GCTGCGGCCG GCAAACAAAT GGCGCCGCAT CGAGCAGGCG ACCATGTCTT ACGGCTACGG TCTGTCGGTG TCGCTGTTCC AGATTGCGCA CGCGTACACC ATCTTCGCGC ACGATGGCGA GCTGATTCCG ATCACCATGT ACCGCACCGA TGGCCAGCCG CCGCAGGGCG AGCGCGTAAT CTCGCCGGAG GTGGCGCGCC AGGTCCGTCA GATGCTGGAG ACGGTGACGG CCCCCGGCGG TACCGCACCG CAGGCCCAGG TAATGGGCTA TCGCGTCGGC GGCAAGACCG GCACGGCCTG GAAGCACACC GGACGCGGCT ATGACCGCTC CAAGTATCGT GCCTCGTTCA TTGGCCTGGC GCCGATGTCA AACCCGCGCA TCATCGTGGC CGTGAGCGTG GACGAGCCTA CGGTGGGTAA CCGCTATGGC GGTGGCGCGG CCGGCCCGGT GTTCTCCCAA ATCGTGGGCG GTACCCTGCG CGCGTTGAAC GTGCCGCCGG ATTCGCCGGT ACGGCAGCTC GTGATGACCC CGGATGTGCC GGAAGAACCG GTGGGAGGCC TGCAATGA
|
Protein sequence | MSGARKSNGT TARARLGQFS ASPVLGLRLP MWRSKLVVFL MFAAFLALIG RALWIQGPGN RFYEAEGKKR FQRTLELPAT RGKILDRNGL VLATSLPVKA IWAVPEDVPN NVPGEDMMKL AKLLGMNNKE LSGKLGEDKG FVYLKRQVLP EVADQIAALK IEGIYQTREY KRFYPEGEAM AHIVGFTNVE DKGQEGMELA RESDLAGAAG QRQVIKDRLG RVVEDVGVLK APRNGHDQTL SIDAKIQYLT FNELKAAIER THAKAASAIV LDAQTGEVLA LANYPTYNPN DRSRLSGEQL RNRVLTDTFE PGSMMKPVTI SLALQLKRVT PNTLVQTNGK YSFEGATISD TGNYGTLTVA QVIQHSSNIG TTKIAMMLKP QEMWDMFTSV GLGQAPKIGF PGAVAGRLRP ANKWRRIEQA TMSYGYGLSV SLFQIAHAYT IFAHDGELIP ITMYRTDGQP PQGERVISPE VARQVRQMLE TVTAPGGTAP QAQVMGYRVG GKTGTAWKHT GRGYDRSKYR ASFIGLAPMS NPRIIVAVSV DEPTVGNRYG GGAAGPVFSQ IVGGTLRALN VPPDSPVRQL VMTPDVPEEP VGGLQ
|
| |