Gene Rpic_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3092 
SymbolmraY 
ID6286067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3229559 
End bp3230728 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID642626663 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001900647 
Protein GI187930160 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTGG CATTGGCGCA ATGGTTGCAG AACGACTACG GCTTCCTGCG CGTCTTCAAC 
TATCTGACGT TCCGCGCCGT GATGGCATCG CTCACGGCGC TGGTGATCGG CCTCGGGTTC
GGGCCGTTCG TGATCCGTCG CCTGACGGAA CTGAAAGTCG GCCAGGCTGT GCGCAGCTAT
GGCCCGCAGA CGCACCTGGT CAAGGCCGGC ACGCCCACCA TGGGCGGTGT GCTGGTGCTC
ATCGGCATTG CCGTGTCGAC GCTGCTGTGG GCGGACTGGG GCAACCGCTT CATCTGGATC
GTGCTGCTGG TCACGCTCGG CTATGGCGCG ATCGGCTGGG TCGATGACTA CCGCAAGGTC
GTGCACCGCG ATCCAAAGGG GATGTCTTCG CGCGAGAAGT TCTTCTGGCA GACCGTGATC
GGCCTGTTTG CGGCGGCGTA TCTGGCGTTC TCGGTGTCCG AGACCAGCAA CATGCGCGTG
CTCGAGCTGT TCATGGAGTG GGTGCGCAGC GGCCTGTCGC TGAACCTGCC GGCCAAGTCG
CACCTGATCG TGCCGTTCTT CAAGGAGATC AGCTACCCGC TCGGCGTGTT CGGTTTCATC
ATCCTGACGT ACCTCGTGAT CGTCGGCTCC AGCAATGCGG TGAACCTGAC CGACGGCCTT
GATGGCCTCG TCATCATGCC GGTCGTGCTC GTGGGCAGCG CGCTGGGCGT GTTCGCGTAC
GTGATGGGTA GCGCTGTCTA CAGCAAATAC CTGCTGTTCC CACACATTCC GGGCGCAGGC
GAGCTGCTGA TTTTCTGCTC GGCGATGGCG GGTGCGGGGC TTGCCTTCCT GTGGTTCAAC
GCGCATCCGG CACAGGTGTT CATGGGTGAC GTCGGCGCGC TGGCGCTGGG CGGCGCGCTT
GGCACCATCG CCGTGATCGT GCGCCAGGAA ATCGTGCTCT TCATCATGGG CGGCATCTTC
GTGGCGGAGA CCGTCTCGGT GATGCTGCAG GTGACGTGGT TCAAGTTCAC CAAGAAACGT
TATGGCGAGG GCCGGCGCCT GTTCCGCATG GCGCCGCTGC ATCATCATTT CGAGCTGTCC
GGCTGGAAGG AAACGCAAGT GGTCGTGCGC TTCTGGGTCA TCACCATGAT GCTGGTGCTG
ATCGGCCTGT CGACCCTGAA GCTGCGGTGA
 
Protein sequence
MLLALAQWLQ NDYGFLRVFN YLTFRAVMAS LTALVIGLGF GPFVIRRLTE LKVGQAVRSY 
GPQTHLVKAG TPTMGGVLVL IGIAVSTLLW ADWGNRFIWI VLLVTLGYGA IGWVDDYRKV
VHRDPKGMSS REKFFWQTVI GLFAAAYLAF SVSETSNMRV LELFMEWVRS GLSLNLPAKS
HLIVPFFKEI SYPLGVFGFI ILTYLVIVGS SNAVNLTDGL DGLVIMPVVL VGSALGVFAY
VMGSAVYSKY LLFPHIPGAG ELLIFCSAMA GAGLAFLWFN AHPAQVFMGD VGALALGGAL
GTIAVIVRQE IVLFIMGGIF VAETVSVMLQ VTWFKFTKKR YGEGRRLFRM APLHHHFELS
GWKETQVVVR FWVITMMLVL IGLSTLKLR