| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3082 |
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| Symbol | lpxC |
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| ID | 6289774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3217545 |
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| End bp | 3218462 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626653 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001900637 |
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| Protein GI | 187930150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.436878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAC AACGCACCAT CAAGTCCCTC GTCAAGACCG TCGGCATCGG GTTGCACTCG
GGCCGCAAGG TGACGTTGAC GTTGCGCCCG GCGGCCGCAG GCACCGGCAT CGTCTTCACG
CGTGTTGACC TCGACCCGGC CGTCGAGATT CCGGCCACCG CCAGCGCCAT CGGCGACACC
CGCCTTGCAT CCGTACTGCA AAAGGATGGC GCCCGCGTGT CGACCGTCGA ACATTTGATG
TCCGCTTGCG CAGGCCTTGG CATCGACAAT CTCTATGTCG ACGTCGACGC CGAAGAAATC
CCCATCATGG ACGGCAGCGC GGCCTCGTTC GTGTTTCTGC TGCAATCGGC GGGCATCGAA
GAGCAGGGCG CGGCCAAGCG GTTTATCCGC GTGACCAAGC CGGTGGAAAT CCGCGAGGGC
GACAAGCTTG CACGCCTCGA CCCCTACTTT GGCTTCAAGC TGTCGTTCAC CATCGAATTC
CGTCACCCGG CCGTCGACAA GACCGGCCAG ACGTTCGAGA TCGACTTTGC CGACACCAGC
TACACGCGCG AAATCGCGCG CGCCCGTACG TTTGGTTTTG CCCACGAAGT CGAAATGCTG
CGCGAAGTCG GCCTGGCGCG CGGCGGCAGC CTGGACAATG CCATCGTGCT CGACGAGCAC
CGCATGCTCA ACAACGACGA ACTGCGCTAC GGCGATGAGT TCGTCCGTCA CAAGATCCTC
GACGCCATCG GCGATCTGTA TGTGGTCGGT CACCCGCTGA TTGCCGCGTA TACGGCACAC
AAGTCGGGGC ACGGGCTGAA CAATGCGCTG CTGCGCGCAC TGCTGGCCGA TGAAACGGCC
TACGAGATCG TGACGTTCGA CAAAATCGAA GAGGCGCCGC GCGCGTTTCT ACCTCAGTTG
CAACCGGCAT TCTCGTGA
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| Protein sequence | MLKQRTIKSL VKTVGIGLHS GRKVTLTLRP AAAGTGIVFT RVDLDPAVEI PATASAIGDT
RLASVLQKDG ARVSTVEHLM SACAGLGIDN LYVDVDAEEI PIMDGSAASF VFLLQSAGIE
EQGAAKRFIR VTKPVEIREG DKLARLDPYF GFKLSFTIEF RHPAVDKTGQ TFEIDFADTS
YTREIARART FGFAHEVEML REVGLARGGS LDNAIVLDEH RMLNNDELRY GDEFVRHKIL
DAIGDLYVVG HPLIAAYTAH KSGHGLNNAL LRALLADETA YEIVTFDKIE EAPRAFLPQL
QPAFS
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