Gene Rpic_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3077 
Symbol 
ID6288306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3210679 
End bp3211563 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID642626648 
Productprotein of unknown function DUF815 
Protein accessionYP_001900632 
Protein GI187930145 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCG ACCTTTCCGC ACGGCTCGAC CGCTTTCTCG GGCGGCTTGA GCAATGGCTG 
CCGCCTGAAC TGACCGAAGC TGACTGGAAC GAGGCCGTTG CGTTCCGCTG GCGCAAGCGC
CAGAGCCTGT TCGGCAACAT CGGCTATCTC GCACCGATCC GCCAACTGCC CCCGATCCAT
CTGAGCGATC TGCACAACAT CGAGCGCCAG AAAGACGCCA TCGTCGCCAA TACGCGCCAG
TTCGTGCGCA AGTTGCCGGC CAACAACGTG CTGCTGACGG GCGCACGGGG CACCGGCAAG
TCGTCGCTCA TCAAGGCGTG CCTGAATGAG TTCGTGAAGG AAGGCCTGCG CTTGGTCGAG
GTCGACAAGG ACGATCTGGC TGACTTGGGC GATATCGTCG ATCAACTCTC GGCGCGCCCC
GAGCGCTTCG CGATCTTCTG CGATGACCTT TCGTTCGAAG AGGGCGAGTC GGGCTACAAG
GCGCTGAAGT CTGCGCTGGA CGGCTCGGTG GCAACGCAGT CAGACAACGT GCTGATCTAC
GCAACATCGA ACCGGCGCCA CCTGCTGCCG GAATACATGA AGGACAACGA GACCTATCAG
CACACCTCGG ACGGCGAAAT CCATCCGGGC GAGGTGGTGG AAGAGAAGAT CTCGCTGTCG
GAGCGGTTTG GGCTGTGGCT GTCGTTCTAC CCGCCCAAGC AGGACGAATA CCTGACCATC
GTCGGCCACT GGCTCAAGTA CTTCGGCTGC AGTGACGAGG ACATCGCGGC CGCCCGTGGC
GACGCGTTGG TATGGGCGCT GGAGCGCGGT TCGCGTTCGG GCCGCGTGGC ATGGCAATTC
GCCCGCGACT GGGGTGGCAA GCATGGGCGG CACCATGTCG ACTGA
 
Protein sequence
MSSDLSARLD RFLGRLEQWL PPELTEADWN EAVAFRWRKR QSLFGNIGYL APIRQLPPIH 
LSDLHNIERQ KDAIVANTRQ FVRKLPANNV LLTGARGTGK SSLIKACLNE FVKEGLRLVE
VDKDDLADLG DIVDQLSARP ERFAIFCDDL SFEEGESGYK ALKSALDGSV ATQSDNVLIY
ATSNRRHLLP EYMKDNETYQ HTSDGEIHPG EVVEEKISLS ERFGLWLSFY PPKQDEYLTI
VGHWLKYFGC SDEDIAAARG DALVWALERG SRSGRVAWQF ARDWGGKHGR HHVD