| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3071 |
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| Symbol | |
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| ID | 6286995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3206353 |
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| End bp | 3207627 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642626642 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001900626 |
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| Protein GI | 187930139 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.203834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAC GAGCACCCGC CGCGAACCGC GCGGCCGCAG CGCCCAATCG CACGACCGGC
AAGACCGCCA AGACCAAGGC GCCCACGCAG TACATCTTCG AGTGGGAAGG CAAAGATCGG
AAAGGCAAGA TCTTCAAGGG CGAGATGCGC GCCGAGAGCA TCACCGAGGT GAATGCCATC
CTGCGCAAGC AAGGCCTGTC GATCACCAAA TCCAAGCGCC GCCGCGCGGC CCGCGGCAAG
AAGATCACGC CGAAGGACAT CGCCTACTTC ACGCGCCAGC TGTCGACCAT GCTGAAGGCC
GGCGTGCCGC TGCTGCAGTC GATCGACATC ATCGCAAAGG GCCACGCCAA CCCGAACTTC
ACGCAACTGC TGACGGAAAT CCGCGTCGAT ATCGAGTCGG GCAGCAGCAT GGCGCAAGCC
TTCCGCCGTC ACCCGAAGTA CTTCGACACG CTGTACTGCA ACCTGATCGA CGCGGGCGAG
CAAGGCGGTA TTCTGGATGC GCTGCTCGAG CGGCTTTCGC TGTACATGGA AAAGTCCCTC
GCACTGAAGG CGCAGATCAA GTCGGCCCTG ATCTACCCGA TCTCGGTGCT GACGGTGGCC
TTCCTAGTGA CCGTGGTGCT GATGATCTTT GTGGTGCCGT CGTTCAAGGG CGTTTTCTCC
GGTTTCGGTG CCGATTTGCC AGCCCCGACG CTGTTCGTCA TTGCGATATC GGATTTCTTC
GTCAAGTGGT GGATACCGAT CGTGCTGGGC CCCATCGCCG GCATTGCACT GTTTTCGCGC
GCATTCAAGC GATCTGAAAA CGTCCAGCGT TCGACGCATC GCTTCATCCT GAAGATTCCC
ATCTTTGGCG ACATCATCCG CAAGGCAACC ATTGCTCGCT GGACGCGTAC GCTGGCTACC
ATGTTCGCAG CCGGTACGCC GCTCGTGGAG TCGATGGAGT CGGTCGCCGG GGCCGCAGGC
AACTGGATCT ACCATGATGC GACCCTCGAG GTTCAGCAAG CGGTACGTAT CGGCACGAGT
CTCACCAACG CCATGCAAGC GACACACGTG TTCGACAACA TGGTCCTGCA GATGACGCAG
ATCGGTGAAG AGTCCGGCGC CCTGGACAAC ATGCTACTGA AGGTGGCGGA GTTCTACGAG
CGCGAGGTGG ACGATGCGGT CGCCAACATC TCGACTCTGA TCGAACCCAT CATCATCGTC
TTCCTCGGCG TGCTAATCGG CGGCATGGTG GTGGCGATGT ATTTGCCGAT CTTCAAGCTT
GGTACGGTGG TCTGA
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| Protein sequence | MATRAPAANR AAAAPNRTTG KTAKTKAPTQ YIFEWEGKDR KGKIFKGEMR AESITEVNAI
LRKQGLSITK SKRRRAARGK KITPKDIAYF TRQLSTMLKA GVPLLQSIDI IAKGHANPNF
TQLLTEIRVD IESGSSMAQA FRRHPKYFDT LYCNLIDAGE QGGILDALLE RLSLYMEKSL
ALKAQIKSAL IYPISVLTVA FLVTVVLMIF VVPSFKGVFS GFGADLPAPT LFVIAISDFF
VKWWIPIVLG PIAGIALFSR AFKRSENVQR STHRFILKIP IFGDIIRKAT IARWTRTLAT
MFAAGTPLVE SMESVAGAAG NWIYHDATLE VQQAVRIGTS LTNAMQATHV FDNMVLQMTQ
IGEESGALDN MLLKVAEFYE REVDDAVANI STLIEPIIIV FLGVLIGGMV VAMYLPIFKL
GTVV
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