| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3061 |
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| Symbol | |
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| ID | 6286858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3195070 |
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| End bp | 3196794 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626631 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001900616 |
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| Protein GI | 187930129 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGT CCCAATTCTT CATTTCCACG CTCAAGGAAG CGCCCGCTGA CGCGGAGATC
GTCTCGCACA AGTTGATGAT GCGTGCCGGC ATGATCAAGA AGCTTGGCGC GGGCCTCTAT
ACGTACATGC CCGTGGGTCT GCGCGTGATC CGCAAGGTCG AGCAGATCGT GCGTGAGGAA
ATGAATGCCG CCGGCGCGGT GGAGGTGCTG ATGCCGGTGG TGCAGCCGGG CGAGCTGTGG
CAGGAGACCG GCCGCTGGGA CAAGATGGGC GACGAGCTGC TGCGCTTCAA GGATCGCCAC
GAGCGCGACT TCGTCATGCA GCCGACGTCG GAGGAGGTGG TGACCGACAT CGCCCGCACT
GAAATTCGCT CGTACAAGCA GCTGCCCGTC AATTTCTACC AGATCCAGAC CAAGTTCCGC
GACGAGCGCC GCCCGCGTTT CGGCATCATG CGCGGCCGCG AATTCACGAT GAAGGACGCG
TACTCCTTCG ACCGCGACGC CGAGGGCCTG AAGGTGTCGT ACCAGAAGAT GTACGACGCG
TACACGCGCA TCTTCCAGCG CTTTGGCCTG GAATTCCGCG CCGTGGCGGC CGATAACGGC
GCGATTGGCG GATCGGGCTC GCACGAATTC CACGTGATTG CCGACACGGG CGAAGACGCC
ATCATCTACT GCCCGGATTC GGACTACGCC GCGAACATCG AGGCTGCTGA AGCCGTCGCC
CCGGCCGCAC CGCGTGCCGC TGCCACCGAA GCGCTCACCA AGACGCATAC GCCCGGCCGC
GCCAAGTGCG AGGCCGTGGC CGAGCAACTG GGTATTCCGC TGCAGCGCAC GATCAAATCC
ATCGTGCTGG CCACCGAAGT CGAGGGCGGC GAGCCCCAGA TTTGGTTGCT GCTGCTGCGC
GGCGACCATG AACTCAACGA GGTCAAGGCA TCGAAGGTGC CGGGCCTTGC CGACTTCCGC
TTTGCCACCG AAGGCGAAAT CCTGCGTGCG TTCGGCACGC GGCCGGGCTA TTTGGGTCCG
GTCGGCACGA AGCTGCCCGT GAAGGTGGTG GCCGATCGCA CGGCGGCCGC GATGAGCGAT
TTCGTGGTCG GCGCCAACGA AGAGGACTAC CACTTCACTG GCGTGAACTG GGGCCGCGAT
CTGCCCGAGC CGGAGGTCTA CGACCTGCGC AATGTGGTGG CAGGCGACGC CTCGCCGGAC
GGCAAGGGCA CGCTGGCGAT CTGCCGCGGC ATCGAAGTCG GTCACGTCTT CATGCTGGGC
ACGCGCTACT CCGAGGCGAT GAATGCGACG TTCCTCGATG AGAACGGGAA GACGCAGCCG
ATGGTGATGG GCTGCTACGG CATCGGCATC ACGCGCATCC TGGGTGCGGC CATCGAGCAG
AACTACGATG CGCGCGGGAT CATCTGGCCG GCATCGATCG CGCCGTTCCA GGTGGTGATC
TGCCCCGTGG GCTACGACCG GTCCGACGCC GTGCGCGAGG AAGCCGACCG CCTGCACGCC
GAGCTGGTCG CCGCCGGCAT CGACGTGATG TTGGACGACC GCGGCGAGCG CCCCGGCGCG
ATGTTCGCCG ACTGGGAGCT GATCGGCGTG CCGTTCCGCG TGGTGGTGGG TGACCGCGGC
CTGAAGGAAG GCAAGCTGGA ATTCCAGGGC CGCCGAGACG AAGCCGCCAC CGCCGTGGCG
CCCGCCGACG TGCTGGCTAC GCTGAAGGCG CGTCTCGCAC AATAA
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| Protein sequence | MKASQFFIST LKEAPADAEI VSHKLMMRAG MIKKLGAGLY TYMPVGLRVI RKVEQIVREE
MNAAGAVEVL MPVVQPGELW QETGRWDKMG DELLRFKDRH ERDFVMQPTS EEVVTDIART
EIRSYKQLPV NFYQIQTKFR DERRPRFGIM RGREFTMKDA YSFDRDAEGL KVSYQKMYDA
YTRIFQRFGL EFRAVAADNG AIGGSGSHEF HVIADTGEDA IIYCPDSDYA ANIEAAEAVA
PAAPRAAATE ALTKTHTPGR AKCEAVAEQL GIPLQRTIKS IVLATEVEGG EPQIWLLLLR
GDHELNEVKA SKVPGLADFR FATEGEILRA FGTRPGYLGP VGTKLPVKVV ADRTAAAMSD
FVVGANEEDY HFTGVNWGRD LPEPEVYDLR NVVAGDASPD GKGTLAICRG IEVGHVFMLG
TRYSEAMNAT FLDENGKTQP MVMGCYGIGI TRILGAAIEQ NYDARGIIWP ASIAPFQVVI
CPVGYDRSDA VREEADRLHA ELVAAGIDVM LDDRGERPGA MFADWELIGV PFRVVVGDRG
LKEGKLEFQG RRDEAATAVA PADVLATLKA RLAQ
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