| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3060 |
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| Symbol | |
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| ID | 6286857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3194286 |
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| End bp | 3195047 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642626630 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001900615 |
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| Protein GI | 187930128 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCT TGTCTTCCGC CCGCCTGATC GTCACTGCGC TGTGCGCGGG GACGTTGCTC
GCGGGCACGC AGCTGGCGTG GGCGGGCGCC CAGAAAGAGG AATACCTGGC GGACTCCGTG
CGCAGCGCGC TGTCTGCCGC GGTGGCCGAC AGCCGTCCGC TGCGCCCGGT CTTTGCCAGC
AACGACGAGC AACTCGGCTA CCTGCGCTGG CTGGCGGAGA TGTCGGTGCG CATGTCGGGC
AAGATCCCGC AGGCGTCGGT ACGCGTCGAA CTGATCGAGA CGGCGTATTA CGAGGCCAAG
CGTGCTGGCC TGGACCCGGC GCTGGTGCTC GGGCTCATCC AGGTGGAAAG CGGCTTTCGC
AAGTACGCCA TCAGCAGTGC CGGGGCGATG GGCCTGATGC AGGTGATGCC GTTCTGGACC
CGCAGCATCG GCGACAACGA CTCGCGCAAG CTCTTCCACC TGCAGAGCAA CCTGCGCTAC
GGCTGCACGA TCCTGCGTCA TTACCTCGAC ATGGAAGGCG GCAATCTGTA CCTGGCGCTT
GGCCGCTACA ACGGCAGCCG CGGTCAGCCG CAGTATCCGA ATGCCGTGCT GGCGGCCTGG
AAGCGTTGGC AATATCAGGA GTCGAGCGCG ATGACGGTGT CGGCGCCGGT GCCTGCCGAG
CCCGCTGTGC CCACGCCGCG TGCCAAGGCG CTGCCGGAAG TGCCGGCGCG CAATCCGTTC
TCGCCGCTGC GTATTGCTGG CGGTCCGGCT GGCGGTTCGT GA
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| Protein sequence | MRRLSSARLI VTALCAGTLL AGTQLAWAGA QKEEYLADSV RSALSAAVAD SRPLRPVFAS
NDEQLGYLRW LAEMSVRMSG KIPQASVRVE LIETAYYEAK RAGLDPALVL GLIQVESGFR
KYAISSAGAM GLMQVMPFWT RSIGDNDSRK LFHLQSNLRY GCTILRHYLD MEGGNLYLAL
GRYNGSRGQP QYPNAVLAAW KRWQYQESSA MTVSAPVPAE PAVPTPRAKA LPEVPARNPF
SPLRIAGGPA GGS
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