Gene Rpic_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3057 
Symbol 
ID6286173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3192133 
End bp3192681 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content65% 
IMG OID642626627 
Producthypoxanthine-guanine phosphoribosyltransferase 
Protein accessionYP_001900612 
Protein GI187930125 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.549444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG CAGAACAGGC CCGCGAACTC TGGGCCAACT CCGAAGAAAT CGTCAGCGAA 
GACGCCGTGC GCGGCTCGCT GGACCGCATG GCCGAAGAGA TCACCGAGAA GATCGGCGAC
ACGTTCCCGA TGGTGCTGTC CGTGATGGGC GGCGCGGCGG TCTTTACCGG CATGCTGCTG
CCCAAGCTGG CCTTCCCGCT GGAGTTCGAC TACATCCACC TCTCCCGCTA CAACAACAAG
ACGGTGGGCG GCGAGATGCA GTGGCGCGTG GCGCCGCGCG AGTCGGTCAA GGGCCGCACG
GTGCTGGTGC TCGACGACAT CCTCGACGAA GGCGAGACGA TGGCCGCCAT CCGCTCGCGC
ATCATCGACA TGGGTGCCGC GGAGTTCTAT TCCGCCGTGC TCTGCGAGAA GACGCTCGCC
AAATCGAAGC CGCTGCACCC TGACTTCTGC GGCTTCAACG TGCCTGACCG CTACGTGTTC
GGCTGCGGAA TGGACGCCAA GGGCTACTGG CGCAACCTGC CGACCATCCG CGCGCTCAAG
AACACCTGA
 
Protein sequence
MLSAEQAREL WANSEEIVSE DAVRGSLDRM AEEITEKIGD TFPMVLSVMG GAAVFTGMLL 
PKLAFPLEFD YIHLSRYNNK TVGGEMQWRV APRESVKGRT VLVLDDILDE GETMAAIRSR
IIDMGAAEFY SAVLCEKTLA KSKPLHPDFC GFNVPDRYVF GCGMDAKGYW RNLPTIRALK
NT