Gene Rpic_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3055 
Symbol 
ID6288241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3189566 
End bp3190474 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID642626625 
Productcytochrome c assembly protein 
Protein accessionYP_001900610 
Protein GI187930123 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG TACTGTATGC GCTGACGGCG CTTCTCTACG GCATCCTCGC TTCGGTAGCG 
TGGGCGCGAC GCGGTGGACT GGGTGCCCGG GCGCCGGCGG GAGCCATGGC GGCAGGCGGT
CAGTCGCCGG GTGCCACGGT GCTCGTTCCG CCGCCTCCGG GGGCTGCTGA CACTGTCCCG
GGCTGGTGGC GCTGGGGTCT GCTGGCCGCC TTGATCGCGC ACGGGTTCCT GCTGCACGAG
ACGATCTTCC CGGCCAGCGC CATGATATTT GGCTTTGCCT ATGCGCTGTC GGCCATGCTG
TGGCTGGGCG TGGGCATTTT CTGGATCGAA AGCCTCTTCT TCTCGCTGGC CGGCCTCGGC
TTGCTCGTGA TGCCAGTGGC GCTGGTCGGA AGTCTGCTGC CATTGGCCTT TCCGGGCACG
CAAATTCTCG GCTATGCGGC CAGCCCCCTG TTCAAGCTGC ACTTCGCTAT TGCCAACGTC
GCCTACGGGC TGTTCACGCT AGCGGCATTC CACGCGATCC TCATGCTGGC TGCAGAGCGC
CGCCTGCACA CCATCAACCG CCCGGAGGCA AGCGGGTTCG GCCGTTGGCT GGATCTGCTG
CCGCCGCTGC TCACGCTCGA AAAACTGCTG TTCCGGCTGA TCGGGGCGGG CTTCGTTCTG
CTGACGCTGA CGATCGCCTC GGGCGTGCTG TTCTCCGAGC AGCTGTTTCA CAGCGCTTTC
CATTTCGATC ACAAGAATAT CTTTGCCGTG CTGTCGTGGG TGATGTTCGG CGGCATTCTG
ATCGGTCGGC GTTTTCGCGG CTGGCGCGGA CGCGTGGCGC TGCGCTGGGT GATGGCGGCC
TTCGCGATCC TGATGCTGGC GTACGTGGGC AGCCGCTTCG TGCTCGAAGT CATCCTGCAT
CGCGCCTAG
 
Protein sequence
MAIVLYALTA LLYGILASVA WARRGGLGAR APAGAMAAGG QSPGATVLVP PPPGAADTVP 
GWWRWGLLAA LIAHGFLLHE TIFPASAMIF GFAYALSAML WLGVGIFWIE SLFFSLAGLG
LLVMPVALVG SLLPLAFPGT QILGYAASPL FKLHFAIANV AYGLFTLAAF HAILMLAAER
RLHTINRPEA SGFGRWLDLL PPLLTLEKLL FRLIGAGFVL LTLTIASGVL FSEQLFHSAF
HFDHKNIFAV LSWVMFGGIL IGRRFRGWRG RVALRWVMAA FAILMLAYVG SRFVLEVILH
RA