| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3050 |
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| Symbol | |
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| ID | 6288625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3182150 |
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| End bp | 3184309 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642626620 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_001900605 |
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| Protein GI | 187930118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.79253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG ACACGAACCA CGCCAACAAC GGCAGCCGCC GCAACTTCCT CAAGATGGCC
AGCACGGGGG CGATTTCCGC CGCTGCGCTC GCCGCCTTCC CGCCGTCGAT CCGCCGTGCG
CTCGCGATTC CCGCCAACAA CGCCACCGGC ACGATGCGCG ACGTTGAGCA CGTGGTGATC
CTGATGCAGG AGAACCGCTC GTTCGACAAC TACTTCGGCA CGCTGAAAGG TGTGCGCGGC
TTTGGCGACC GCTTCCCCAT CCCGCTGGCC GGCGGGCTGA ACGTCTGGCA GCAGACCTAT
GTGCCAAGCA GCGGGCCGAG CCGCGTCGTG CTGCCGTACT ACCTGGACAG CAGCGCCGGC
AACGCGCAGC GCGTCTCCGG CACGCCACAC AGCTACCCTG ATGCGCAGAA CGCATGGGAC
CTCGGCCGCA TGAGCAAGTG GCCGACCTAC AAGCAGACGC AGTCGATGGG CTACTACAAG
CAGGCCGAGC TGGACTTCCA GTTCGCGCTG GCCAATGCCT TCACGCTGTG CGATGCGTAC
CACTGCGCCT TCCACGGCGG CACCAACACC AACCGCCTGT TCCACTGGAC GGGCACGAAC
GACCCGACCG GCGCTGCGGG CGGCCCCGTC ATCGACAACA GCGGCGACCA CCTCGATGCC
AGCGTCACGT ACAACTGGAC GACCTACCCC GAGCGCCTGC AAACGGCCGG CGTGTCGTGG
AAGGTCTACC AGAACATGCC GGACAACTTC ACCGACAACC CGCTCGCGGG GTTCAAGGCC
TACCGCGATG CCAACGCCGC GCGCGGCAAC CTTGCCGACG GCACGCCGTT CCCGCCGTAC
ACGCCGGCCG ACGAAACCGT CAGCCCGCTC ATCAAGGGCA TCGGCAACAC CATGCCCGAC
GGCGGCTTCC TGCAGGCCTT GAAGGACGAC ATTGCCGCAG GCCTTCTGCC GCAGGTGTCG
TGGATTGTCG CGCCGGCCAC GTATTCCGAA CACCCCGGCC CGTCGAGCCC CGTGCAGGGC
GCGTGGTACA CGCAGGAAGT GCTCAACGCA CTCACCGCCA ACCCGGCCGT GTGGAGCAAG
ACCGTGCTGT TCATCAACTT CGATGAGAAC GACGGCTTCT TCGACCACGT GCCCCCGCCC
GCGGCCCCTG CCTACGAAAA CGGCGTGCTG GCCGGCAAAT CGACCATCAG CACGGCCGGC
GAATACCACA CGGACCAACA CCCCTACGGC CCCGGCCCGC GTGTGCCGAT GTACATCGTC
TCGCCGTGGA GCCGTGGCGG CTGGGTCAAC TCGCAGACGT TCGACCACAC CTCGGTGCTG
CGCTTCCTGG AACTGCGCTT CAACGTCAAG GAGACGAACA TCAGCGCGTA CCGCCGCGCC
GTGCTGGGCG ACCTGACCAG CGCCTTCAAC TTCGTCAACC CGAACAACGA GACACTGCCG
ACGCTGCCAA GCCGCGACAA GGCAACCGCC GACGCCATCC GCACCGCGCA AGGGCTGCAG
CCGCAGGTGC CGCTGCCCTC CGTCACGGCG CAGCAGATGC CTACACAAGC CACCGGCACC
CGTCCCTCGC GGGCCCTGCC GTACGAGCTG CACGTCAGCG CCCGCGAAGA CGCCACCAAC
CGCGCGCTGC GCCTGATCTT CAGCAACACC GGCACGGCCG CGGCTGTCTT CCACGTGTAC
GACCGCCTGC ATCTGGACCG CGTGCCGCGC CGCTATGCGG TGGAGCCCGG CAAGATGCTC
GACGACACGT GGGACGTGTT CACCGCAGAC AAGGGCAAGT ACGACCTGTG GGTGCTGGGC
CCCAACGGCT TCCACCGCGC GTTCTCGGGC GATGTGAGCG CCGTGTCGGC AGCGGGTTCG
AGCGCACCGG AAATCCGCGT GTGCTACGAC CTGGCCAACG CCGAGGTCTA CGTGACGATG
ATGAACACCG GCACCGCCGG CTGCACCTTC ACAGTCAAGC CGAATGCGTA CCGCAACGAC
GGCCCGTGGA CGTACGACAT CCCGGCCGGC AAGCAGCTCG ACCAGCACTG GCCGATCGCG
CGCCAGGGCA ACTGGTACGA CTTCACGGTG ACGGTGCCGC AAGGCGGCTT CACGCGGCGC
TTTGCCGGTC GCATGGAAAC GGGCAAGGAC AGCGTGTCCG ACCCCGCGAT GGGCACCTGA
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| Protein sequence | MTSDTNHANN GSRRNFLKMA STGAISAAAL AAFPPSIRRA LAIPANNATG TMRDVEHVVI
LMQENRSFDN YFGTLKGVRG FGDRFPIPLA GGLNVWQQTY VPSSGPSRVV LPYYLDSSAG
NAQRVSGTPH SYPDAQNAWD LGRMSKWPTY KQTQSMGYYK QAELDFQFAL ANAFTLCDAY
HCAFHGGTNT NRLFHWTGTN DPTGAAGGPV IDNSGDHLDA SVTYNWTTYP ERLQTAGVSW
KVYQNMPDNF TDNPLAGFKA YRDANAARGN LADGTPFPPY TPADETVSPL IKGIGNTMPD
GGFLQALKDD IAAGLLPQVS WIVAPATYSE HPGPSSPVQG AWYTQEVLNA LTANPAVWSK
TVLFINFDEN DGFFDHVPPP AAPAYENGVL AGKSTISTAG EYHTDQHPYG PGPRVPMYIV
SPWSRGGWVN SQTFDHTSVL RFLELRFNVK ETNISAYRRA VLGDLTSAFN FVNPNNETLP
TLPSRDKATA DAIRTAQGLQ PQVPLPSVTA QQMPTQATGT RPSRALPYEL HVSAREDATN
RALRLIFSNT GTAAAVFHVY DRLHLDRVPR RYAVEPGKML DDTWDVFTAD KGKYDLWVLG
PNGFHRAFSG DVSAVSAAGS SAPEIRVCYD LANAEVYVTM MNTGTAGCTF TVKPNAYRND
GPWTYDIPAG KQLDQHWPIA RQGNWYDFTV TVPQGGFTRR FAGRMETGKD SVSDPAMGT
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