| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3047 |
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| Symbol | |
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| ID | 6289207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3176218 |
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| End bp | 3179202 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626617 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001900602 |
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| Protein GI | 187930115 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACGG CCCAATCCGA AATCCACTCC GGCACCGCCA ATCCTTCGCA ATTTGCGCAA
AGCGCTGGCG GCACGGCCGT GGCCCCCGGC ACCGCTTCCG GCGTCAATCT TGCCGACTAC
AAGATCATTC GCCGCAACGG CGCCGTGGTG AGCTTCGAGC CTTCGAAGAT CGCCGTGGCC
ATGACCAAGG CTTTCCTCGC CGTGAATGGC GGGCAGGGTG CTGCTTCCGC GCGTGTGCGC
GAGCTGGTCG ACCAACAAAC GCAGAACGTC GTTCGCGCAC TGCTGCGCAG CCGCCCGAAC
GGCGGCACGT TCCATATCGA AGACGTGCAG GACCAGGTGG AACTGGCCCT GATGCGCTCG
GGCGAGCACG ACGTGGCCCG CGCCTACGTG CTGTACCGCG AGCGCCGCGC CCAGGAGCGC
GCGCAAGCCG GCGAAACCCA GCAGCAACCG GCCTTCATCG GCCTGAACGT GACCGACGGC
GGCATCACCC GCCCGTTGGA CATGGCGGCG CTGCGCAACG TGATCGTCTC GGCCTGCGAA
GGTCTGGGCG AAGCGGTGGA CCCGGAGCCG ATCCTCAAGG AAACGGTCAA GAACCTGTAT
GAAGGCGTGC CGATGACGCA GGTGTACGAC TCGGCCATCC TGGCCTCGCG TACCCTGATC
GAAAAGGACC CGGCGTACAG CCAGGTCACG GCGCGCATCC TGCTGCACAC GATCCGCCGC
GAAATCCTCG GCGAAGAAGT CACGCAAGCG GAAATGAGCA CTCGCTACGT CGACTACTTC
CCGCAGTTCA TCAAGCGCGG CATCAACGCC GAACTGCTCG ACGACAAGCT GGCCCAGTTC
GACCTGGCCC GCCTGGGCGC AGCGCTGGAC GCCTCGCGCG ACTTCCAGTT CAACTACCTG
GGCCTGCAGA CGCTGTACGA CCGCTACTTC CTGCATATCA GCGAAACCCG CATCGAGATG
CCGCAGGCGT TCTTCATGCG TGTGGCGATG GGCCTGGCGC TGAACGAAAT CGACCGCGAA
GCCCGTGCCA TCGAGTTCTA CCAGCTGCTG TCGTCGTTCG ACTTCATGTC GAGCACGCCG
ACGCTGTTCA ACTCGGGCAC GCGCCGCTCG CAGCTGTCGT CGTGCTACCT GACCACCGTG
TCGGACGATC TGGACGGCAT TTACGAAGCG CTGAAGGAAA ACGCGCTGCT GTCGAAGTTT
GCCGGCGGCC TGGGCAACGA CTGGACCAAC GTGCGCGCAC TCGGCTCGCA CATCAAGGGC
ACCAACGGCA AGAGCCAAGG CGTGGTGCCG TTCCTGAAGG TGGTCAACGA CACGGCCGTG
GCCGTGAACC AGGGCGGCAA GCGCAAGGGC GCTGTCTGTG CGTACCTGGA AACGTGGCAC
CTGGACATCG AAGAATTCCT GGAACTGCGC AAGAACACCG GCGACGACCG CCGCCGCACC
CACGACATGA ACACGGCGAA CTGGATTCCC GACCTGTTCA TGAAGCGCGT GATGGAAGGT
GGCGAGTGGA CGCTGTTCTC GCCGTCCACC TGCCCGGACC TGCATGACAA GGTTGGCAAG
GCATTCGAGC AGGCCTACCT GGCCTACGAA GACAAGGTCG CGCGCGGCGA GATCAAGCTC
TTCAAGAAGA TGCCGGCGCT GCAACTGTGG CGCAAGATGC TGGGCATGCT GTTCGAAACC
GGCCATCCGT GGATCACGTT CAAGGATCCG TGCAACATCC GCAGCCCACA GCAGCACGTG
GGCGTGGTGC ACAGCTCCAA CCTGTGCACG GAAATCACGC TGAACACCAA CGACAGCGAA
ATCGCCGTGT GCAACCTGGG TTCGGTCAAC CTGGTCGCTC ACCTGGTCAA GCAGGCTGAC
GGCAGCGTCG TGCTCGATCA CGAGAAGCTG AAGAAGACCG TGCGCACCGC CATGCGCATG
CTCGACAACG TGATCGACAT CAACTACTAC GCGGTCAAGA AGGCGCGTGA TTCGAACCTG
CGCCACCGTC CGGTCGGCAT GGGCATCATG GGCTTCCAGG ACGCGCTGCA CGTGCTGCGT
GTGCCATACG CCAGCGACGC AGCGGTGCAG TTTGCCGACA CCTCGATGGA AGCCGTGTGC
TACTACGCCT ACTGGGCGTC GACCGAGCTG GCTGAAGAGC GCGGCCGCTA CAGCAGCTAC
AAGGGCTCGC TGTGGGATCG CGGCATCCTG CCGCAAGACT CGCTCAAGCT GCTGGCCGAA
GAGCGCGGCG GCTACCTCGA AGCCGACATG TCGTCGACCA TGGACTGGGA CAGCCTGCGC
GGCCGCATCA AGCAGTACGG CATGCGCAAC TCGAACTGCG TGGCGATCGC TCCGACGGCA
ACGATCTCCA ACATCATCGG CGTGTCGGCT TGCATTGAGC CGACGTACCA GAACCTGTAC
GTCAAGTCGA ACCTGTCGGG TGAGTTCACG GTGGTCAACG ACTACCTGGT GCGCGACCTG
AAGGCACGCG GCCTGTGGGA CGAGGTGATG GTCGCCGACC TGAAGTACTT CGACGGCTCG
CTGGCCCGCA TCGACCGCAT CCCGCAAGAC CTGCGCGACC TGTACGCAAC GGCTTTCGAA
GTGGAGCCGC TGTGGCTGGT GGAAGCAGCA TCGCGCCGCC AGAAGTGGAT CGACCAGGCG
CAGTCGCTGA ACATCTACAT GGCCGGCGCG TCGGGCAAGA AGCTGGACGA CACGTACAAG
CTGGCGTGGC TGCGTGGCCT GAAGACCACG TACTACCTGC GCACGATCGG CGCCACGCAC
GTAGAGAAGT CGACCGTGTC GCGCGGCACG CTCAATGCGG TGTCGTCGGG TAGCGATATC
GGTGGTGTGT CGGCGGCAGG TGCATCCGGA GTGACTTCGG CCGCGCCGGC CAGCGCGCTG
GATGCCGCTG CTGCCACCGC CCAGGCGATG CCGGAAGCTG AAGGCGCCGT GTGCACGATG
CGCCCAGGCG ACCCCGGTTT CGAGGAATGC GAAGCCTGCC AATAA
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| Protein sequence | MQTAQSEIHS GTANPSQFAQ SAGGTAVAPG TASGVNLADY KIIRRNGAVV SFEPSKIAVA
MTKAFLAVNG GQGAASARVR ELVDQQTQNV VRALLRSRPN GGTFHIEDVQ DQVELALMRS
GEHDVARAYV LYRERRAQER AQAGETQQQP AFIGLNVTDG GITRPLDMAA LRNVIVSACE
GLGEAVDPEP ILKETVKNLY EGVPMTQVYD SAILASRTLI EKDPAYSQVT ARILLHTIRR
EILGEEVTQA EMSTRYVDYF PQFIKRGINA ELLDDKLAQF DLARLGAALD ASRDFQFNYL
GLQTLYDRYF LHISETRIEM PQAFFMRVAM GLALNEIDRE ARAIEFYQLL SSFDFMSSTP
TLFNSGTRRS QLSSCYLTTV SDDLDGIYEA LKENALLSKF AGGLGNDWTN VRALGSHIKG
TNGKSQGVVP FLKVVNDTAV AVNQGGKRKG AVCAYLETWH LDIEEFLELR KNTGDDRRRT
HDMNTANWIP DLFMKRVMEG GEWTLFSPST CPDLHDKVGK AFEQAYLAYE DKVARGEIKL
FKKMPALQLW RKMLGMLFET GHPWITFKDP CNIRSPQQHV GVVHSSNLCT EITLNTNDSE
IAVCNLGSVN LVAHLVKQAD GSVVLDHEKL KKTVRTAMRM LDNVIDINYY AVKKARDSNL
RHRPVGMGIM GFQDALHVLR VPYASDAAVQ FADTSMEAVC YYAYWASTEL AEERGRYSSY
KGSLWDRGIL PQDSLKLLAE ERGGYLEADM SSTMDWDSLR GRIKQYGMRN SNCVAIAPTA
TISNIIGVSA CIEPTYQNLY VKSNLSGEFT VVNDYLVRDL KARGLWDEVM VADLKYFDGS
LARIDRIPQD LRDLYATAFE VEPLWLVEAA SRRQKWIDQA QSLNIYMAGA SGKKLDDTYK
LAWLRGLKTT YYLRTIGATH VEKSTVSRGT LNAVSSGSDI GGVSAAGASG VTSAAPASAL
DAAAATAQAM PEAEGAVCTM RPGDPGFEEC EACQ
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