| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3046 |
|---|
| Symbol | |
|---|
| ID | 6289206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3174893 |
|---|
| End bp | 3176101 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642626616 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit beta |
|---|
| Protein accession | YP_001900601 |
|---|
| Protein GI | 187930114 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCT GGGACGACGA CGTCAAACCT GCCGCACAAC CGCAAGCTGC GCCGCAGCCC
GCGTACCAAC CGCAGCCGCA GCTGCAAACG GCCACCGCCG ACCAGGGCGG CGTGCTGCCC
CCGTCGGCCA CGCAGGCCGC CGGCACGGGC ATCCTTGGCA ACAATCCGAA CGCCGCTGCC
GCACAGAGCA ACCGCCGCGT GAACGCCGCC GACAAGCGCG TCATCAACGG CGCCACCGAC
GTCAACCAGC TGGTGCCGTT CAAGTACAAG TGGGCCTGGG AAAAGTACCT GGCCGGCTGC
GCGAACCACT GGATGCCGCA GGAAATCAAC ATGTCGCGCG ACATCGCGAC GTGGAAAGAC
CCGAACGGTC TGACCGAAGA CGAGCGCCGC ATCATCAAGC GCAACCTGGG CTTCTTCGTG
ACGGCCGACT CGCTGGCCGC CAACAACATC GTGCTGGGCA CGTACCGCCA GATCACCGCG
CCGGAATGCC GCCAGTACCT GCTGCGCCAG GCGTTTGAAG AGGCGATCCA TACGCACGCG
TATCAGTACA TCGTTGAATC GCTGGGCCTG AACGAGGCCG AGATCTTCAA CGCGTACCAC
GAAGTGCAGT CGATCCGCGA CAAGGACGAG TTCCTGATCC CGTTCATCGA CACGCTGACC
GATCCGTCCT TCAAGACCGG CACGCCCGAG AACGACCAGA AGCTGCTGAA GTCGCTCATC
GTCTTCGCCT GCATCATGGA AGGCCTGTTC TTCTACGTCG GCTTCACGCA GATCCTGGCG
ATGGGCCGTC AGAACAAGAT GACCGGCGCT GCGGAGCAGT ACCAGTACAT CCTGCGCGAC
GAGTCGCTGC ACTGCAATTT CGGTATCGAC CTGATCAACC AGATCAAGCT GGAGAACCCG
CACCTGTGGA CGGCCGAGTT CAAGGCCGAG ATCACGGAGC TGTTCAAGAA GGCCGTCGAC
CTGGAATATC GCTACGCAGA AGACACCATG CCGCGTGGCG TGCTGGGCCT GAACGCACCG
ATGTTCAAGG GCTACCTGCG CTTCATCTGC AACCGTCGCT GCCAGCAGAT CGGCCTGGAC
GCGCTGTTCC CGAACGAGGA AAACCCGTTC CCGTGGATGA GCGAGATGAT CGACCTGAAG
AAGGAGCGCA ACTTCTTCGA GACGCGCGTG ATCGAGTACC AGACCGGCGG CGCGCTGTCC
TGGGAGTGA
|
|---|
| Protein sequence | MLSWDDDVKP AAQPQAAPQP AYQPQPQLQT ATADQGGVLP PSATQAAGTG ILGNNPNAAA
AQSNRRVNAA DKRVINGATD VNQLVPFKYK WAWEKYLAGC ANHWMPQEIN MSRDIATWKD
PNGLTEDERR IIKRNLGFFV TADSLAANNI VLGTYRQITA PECRQYLLRQ AFEEAIHTHA
YQYIVESLGL NEAEIFNAYH EVQSIRDKDE FLIPFIDTLT DPSFKTGTPE NDQKLLKSLI
VFACIMEGLF FYVGFTQILA MGRQNKMTGA AEQYQYILRD ESLHCNFGID LINQIKLENP
HLWTAEFKAE ITELFKKAVD LEYRYAEDTM PRGVLGLNAP MFKGYLRFIC NRRCQQIGLD
ALFPNEENPF PWMSEMIDLK KERNFFETRV IEYQTGGALS WE
|
|---|
| |