Gene Rpic_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3028 
Symbol 
ID6288390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3156363 
End bp3156887 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content61% 
IMG OID642626598 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001900583 
Protein GI187930096 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCC GCACCACTCT GACTGCCCTG CTGATGGCCG GCCTGATTGC CGCGACGACG 
GGCGTCTATT TCGGGCATCG TGCCACCGAA CCCAAAACGC CGGCTGACAC TGCTGTCGCC
GCGTTTTACA GCAGCAAGCT CCCGGACGCC AATGGCGCCC CGTTGGATCT GGCCGCTTTT
CGTGGTCAGC CGGTGGTGAT CAATTTCTGG GCACCGTGGT GCGGTCCTTG CGTGGAAGAA
ATGCCAGAAC TGTCTGCGCT GGCGCAGGAG CAGAAGGCCC AGGTAAAGTT CGTTGGCATT
GGCATTGACT CGGCGTCCAA TATCCAGACC TTCCTGGGTA AGGTACACGT CACATACCCG
ATTGCGGTGG CGGGCTTTGG TGGGACGGAA CTGGGCCGCC AGTTCGGCAA CGAAGTCGGC
GGCCTACCGT TTACTGTGAT TCTCAATGCA CAAGGTGAGA TCACTTTCCG GAAGATGGGT
CGTGTGCATG CGGACGAACT GCGCGAGGCC CTGCAGCGCA CGTGA
 
Protein sequence
MSRRTTLTAL LMAGLIAATT GVYFGHRATE PKTPADTAVA AFYSSKLPDA NGAPLDLAAF 
RGQPVVINFW APWCGPCVEE MPELSALAQE QKAQVKFVGI GIDSASNIQT FLGKVHVTYP
IAVAGFGGTE LGRQFGNEVG GLPFTVILNA QGEITFRKMG RVHADELREA LQRT