Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3026 |
Symbol | |
ID | 6288415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3154158 |
End bp | 3155543 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642626596 |
Product | UDP-N-acetylmuramate |
Protein accession | YP_001900581 |
Protein GI | 187930094 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCC ACATCCTTGG AATCTGCGGC ACCTTCATGG GCGGCATTGC CCTGATCGCC CGTCAGGCCG GCCACCGCGT CACCGGCTGC GACGCCAACG TCTACCCTCC GATGAGCACC CAGCTCGAAG CGCAAGGCAT CGAGCTGATC GAAGGCTTTG ACCCCGAACA GCTCTCCATC GGCGCCGATC TTTACGTGAT CGGCAACGTG ATCTCCCGTG GCAACGCTCT CATGGAAGCC ATCCTGGATC GCAATTTGCC CTACATCTCC GGTCCTCAAT GGCTCGGCGA CAACGTACTA CGCCAGAAGT GGGTGCTTGC CGTGGCAGGC ACACACGGCA AGACGACCAC GACATCGATG CTCGCGTGGA TCCTGCAGGA TGCCGGCTAC AACCCGGGCT TCCTGGTGGG CGGCGTGCCA CGCAACTTCG GGCTGTCGGC GCGCCTGACG GAATCCGACT TCTTCGTGAT TGAAGCGGAC GAGTACGACA CGGCCTTCTT CGACAAGCGC AGCAAGTTCG TTCATTACCG CCCCCGTACA GCCATATTGA ACAACCTCGA ATTCGATCAC GCCGACATCT TTCCCGATCT TGCCGCGATC GAAACCCAAT TTCATCATCT GGTGCGCACC GTGCCCGGTC AGGGCCGCCT CCTGGTCAAT GGTCGGGAAG ATAGCCTGAA GCGTGTACTT GAGCGCGGAT GTTGGTCGGA AGTCGAGCAG TTCGGGGCGG AGGGCAACCT CGGCTGGGAA GTCGAAAACC TCGCCGATGA CGATAGCTTC GATGTCGTTT TCCAGGGCCA AACGCAGGGC AGGGTCCGGT GGGCACTTCA GGGCGACCAC AACCGCATGA ACGCGCTGGC CGCCATTGCC GCCGCCCGCC ACGTGGGCGT GCCGCCTGCC CAAGCCATTG AAAGCCTGGC CCGTTTCGAA AATGTGAAAC GGCGCATGGA AGTGCGTGGC ACCGTGAATG ACGTGACTGT GTACGATGAT TTTGCCCATC ACCCGACGGC GATTCGCACC ACCATCGAGG GCCTGCGCCG TCGTGTCGGC AAGGGGCGCA TCCTGGCAGT GCTGGAGCCA CGGTCAAACA CCATGAAGTT GGGCGTGATG AAACTGGCCC TTCCCGACAG CCTGTCCGGC GCTGAACAGA TCTTCGCTTA TGGCGCAGCC AATGGCCGCG ACGCCCTCGG CTGGGATTTG GCTGGGGCGC TGGCCCCGCT GGGGGAGCGC GCGAAGACGT TTTCTGATCT GAGCGCATTA ATCGAAGCCG TCACAGCTGC CGCCCGCCCG GGCGACCATG TGCTTGTCAT GAGCAACGGC GGCTTCGGAG GCGTACATCA GAAGCTGCTG GACGCCTTGG CCGAACGCGC CGAGACAGCG AATTGA
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Protein sequence | MHIHILGICG TFMGGIALIA RQAGHRVTGC DANVYPPMST QLEAQGIELI EGFDPEQLSI GADLYVIGNV ISRGNALMEA ILDRNLPYIS GPQWLGDNVL RQKWVLAVAG THGKTTTTSM LAWILQDAGY NPGFLVGGVP RNFGLSARLT ESDFFVIEAD EYDTAFFDKR SKFVHYRPRT AILNNLEFDH ADIFPDLAAI ETQFHHLVRT VPGQGRLLVN GREDSLKRVL ERGCWSEVEQ FGAEGNLGWE VENLADDDSF DVVFQGQTQG RVRWALQGDH NRMNALAAIA AARHVGVPPA QAIESLARFE NVKRRMEVRG TVNDVTVYDD FAHHPTAIRT TIEGLRRRVG KGRILAVLEP RSNTMKLGVM KLALPDSLSG AEQIFAYGAA NGRDALGWDL AGALAPLGER AKTFSDLSAL IEAVTAAARP GDHVLVMSNG GFGGVHQKLL DALAERAETA N
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