Gene Rpic_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3020 
SymbolmtgA 
ID6288655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3148082 
End bp3148786 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID642626590 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_001900575 
Protein GI187930088 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.360765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTT GGTTCGGCTA CGTGATCGGC TGCTTCGTTG CGGGCGTGGT CGCACTCAAC 
CTGTACTTCT TCGCTGCCAT CGCGAGTTGG CAGGTATTTG ATCCGTCGTC TACGAGTTTC
ATGCGCGCTG AGCGTATGCG CTTGTGCGGC GCCAATGTTT TCACCTGCAA GGTCGACCAC
CGCTGGGTCA ATTACGACCA GATCTCGCGC AACCTCAAAC GCGCGGTCAT CGCCAGTGAA
GACGCGGATT TCGTCTCGCA CAGCGGCTGG GAAGTCGACG CCATGCTCGA CGCGTGGGAG
AAAAACAAGC GGCGCGGCCA CGTGGTCGCG GGCGGTTCGA CCATCACGCA GCAATTGGCC
AAGAACCTGT TCCTCTCGGG CGAACGCCAC TACCTGCGCA AGGGCGAAGA ACTTGTCATC
ACGTGGATGC TCGAGTTCTG GCTCGATAAG GAACGCATTC TCGAGATCTA TCTGAACTCG
GTGGAATGGG GCGAGGGCGT GTTCGGCGCG GAAGCGGCGG CGCAGCATTA CTTCAAACGC
CCGGCCTCGC AACTCACGGT CGGTCAGGCA GCGCGACTGG CGGCGGCGCT GCCTGCACCG
AAGTGCTTCG ACAAGAAGAG CTACTGCGCC AACGTGCACG TGAACTTCAC GCGCAAGGCC
ACGGTGATCG CCAACCGCAT GGGCTCGGCC ACGCTGCCGG ATTGA
 
Protein sequence
MMRWFGYVIG CFVAGVVALN LYFFAAIASW QVFDPSSTSF MRAERMRLCG ANVFTCKVDH 
RWVNYDQISR NLKRAVIASE DADFVSHSGW EVDAMLDAWE KNKRRGHVVA GGSTITQQLA
KNLFLSGERH YLRKGEELVI TWMLEFWLDK ERILEIYLNS VEWGEGVFGA EAAAQHYFKR
PASQLTVGQA ARLAAALPAP KCFDKKSYCA NVHVNFTRKA TVIANRMGSA TLPD