Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3010 |
Symbol | araH |
ID | 6286178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3138482 |
End bp | 3139492 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626580 |
Product | L-arabinose transporter permease protein |
Protein accession | YP_001900565 |
Protein GI | 187930078 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGC CATCCACCGA ATCCGTGCCG GGCGGCCCGC CACTGGCCGC CCCGGGCATT CCCAGCCGCG CCACCCTCAC CTGGGAGCTG GTCAACCGAT CGGGCATCGT CGTAGTGTTC CTCTTGCTGT TCACCGCGCT AGCGTTCACG GTGCCGGGCT TCGTCAGCAG CCGCAACATC CAGGGCTTGC TGCTGTCCGT CACCTTGATC GGCTCGATCT CGGTCACGAT GATGTTCGTC CTCGCACTCG GCGAAGTGGA CTTGTCCGTT GCCTCCATCG TCGCGTTCGC GGGCGTGGTG GCCTCCACGC TCATCACCGC AACGCACAGC GTGGTGCTTG GCGTCGGGGC CGGCGTGCTG GCCGGCGGCG TGGTCGGGCT CGTCAACGGC GTGCTGGTGG CGCGCTACCA GATCAACTCG TTGATCGTCA CGCTCGCCAT GATGGAAGTC GTGCGCGGGC TCGCCTTCAT CACCTCCAAC GGCGACGCGG TAATGATTTC CGAAGAGCGC TTCTTCGACC TGGGCGGCGG GTCATTCCTC GGCATCTCGT ACCCGATCTG GAGCAACATC GTCGGCTTCG CGGCGTTCGG TTTCCTGCTC AAGAAGACGG TATTCGGCAA GAACGTGCTC GCCGTCGGGG GCAATGAAGA GGCCGCACTG CTTGCTGGCC TACCGGTGAC GCGCATCAAG ATCGCCGTGT TCGTCTTGCA AGGTCTAGTG ACAGGCTTTG CCGGCGTGAT GCTGGCCTCG CGCATGAGCC TGGGCGATCC GAAAACATCG GTCGGGCTTG AGCTGGGCGT GATCTCGGCC TGCGTGCTGG GTGGGGTTTC ACTCACGGGC GGAGTGGCAA CCGTGTCCGG TGTGCTGGTC GGCGTTCTCA TCATGGGGTC GGTGCAGAAC GCAATGAGCC TGATGAACGT GCCGACGTTC TATCAGTACC TGATCCGCGG CGGCATTCTG CTGCTGGCGG TGTGGTTCGA CCGCATTCGC CGCAATAAGC GGGCGAGTTG A
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Protein sequence | MQTPSTESVP GGPPLAAPGI PSRATLTWEL VNRSGIVVVF LLLFTALAFT VPGFVSSRNI QGLLLSVTLI GSISVTMMFV LALGEVDLSV ASIVAFAGVV ASTLITATHS VVLGVGAGVL AGGVVGLVNG VLVARYQINS LIVTLAMMEV VRGLAFITSN GDAVMISEER FFDLGGGSFL GISYPIWSNI VGFAAFGFLL KKTVFGKNVL AVGGNEEAAL LAGLPVTRIK IAVFVLQGLV TGFAGVMLAS RMSLGDPKTS VGLELGVISA CVLGGVSLTG GVATVSGVLV GVLIMGSVQN AMSLMNVPTF YQYLIRGGIL LLAVWFDRIR RNKRAS
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