Gene Rpic_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3007 
Symbol 
ID6286088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3134865 
End bp3135803 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID642626577 
ProductGalactose 1-dehydrogenase 
Protein accessionYP_001900562 
Protein GI187930075 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGTG ACCGTTCCCC CGTTGCGATC GGCATTGTCG GCGTTGGCAA GATCGCGCGC 
GACCAGCATC TGCCGGCGCT TGCCGCGCAG CCGGGCTTCA CGCTTGCGGC CTGCGCGAGC
CCGCATTCGC GCATTGACGG CCTGCCGCAT TACACGACGC TCGAGGCCAT GCTGGCAGAC
GAACGCGCAT TGCAGGCGGT CTCGCTGTGC ACACCGCCGC AGGTGCGGTT TGCCCAGGCC
CGCGCGGCGC TCGCTGCGGG CAAGCACGTG ATGCTGGAGA AGCCTCCCGG TGCCAGCGTC
TCGGAAGTGG CGATCCTCGC TGAACTGGCG CGAAAGCATC GCTGCACATT GTTCGCCTCC
TGGCACTCGC GCCACGCGCC TGGCGTCGAG GTTGCTCGGG AGTGGCTTGC AAGCCGCGCC
ATCGTCTCGG TCAACGTGCA ATGGAAAGAA GATGTACGCC GCTGGCACCC GAACCAGGCA
TGGATCTGGG AGCCCGGCGG CCTTGGCGTG TTCGACCCGG GCATCAACGC GCTATCGATC
CTGACCCGCA TCCTGCCGCA TGCGTTCTTT CTGACGTCGG CCAACCTGTG GGTGCCCGCC
AATCAGCAGA CGCCGATTGC CGCCCACCTC GCATTCACCG ATGAACGCGG CACTGCCATC
GCAGCGGAAT TCGACTGGCG CCATGACGCA GGCGAACTCT GGCAGATCGG TGTGACCACG
AGCGACGGCA CCCTGCGGCT CGCCCAGGGC GGCAAGCAAT TGACCATCGA CGGCGCGGAG
ATCGACGTCG GCCCCGAACG CGAATACCCG AGCCTGTACA CCCGCTTTCT CGAACTGATC
GCCAGCGGCG AAAGCGATGT GGATGTCCGC CCGCTTCAGC ACGTGGCCGA CGCCATGCTG
CTCGGTCGGC GCCATCTGAT TGATCCGTTC GTGCCGTGA
 
Protein sequence
MHGDRSPVAI GIVGVGKIAR DQHLPALAAQ PGFTLAACAS PHSRIDGLPH YTTLEAMLAD 
ERALQAVSLC TPPQVRFAQA RAALAAGKHV MLEKPPGASV SEVAILAELA RKHRCTLFAS
WHSRHAPGVE VAREWLASRA IVSVNVQWKE DVRRWHPNQA WIWEPGGLGV FDPGINALSI
LTRILPHAFF LTSANLWVPA NQQTPIAAHL AFTDERGTAI AAEFDWRHDA GELWQIGVTT
SDGTLRLAQG GKQLTIDGAE IDVGPEREYP SLYTRFLELI ASGESDVDVR PLQHVADAML
LGRRHLIDPF VP