Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3002 |
Symbol | |
ID | 6288834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3129512 |
End bp | 3130261 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642626572 |
Product | protein of unknown function DUF558 |
Protein accession | YP_001900557 |
Protein GI | 187930070 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCTTC CCCGTTTTTT CGTCGACACG CCGCTGGCCC CCAACACCAC CGTCACGCTG GACGAGTCCG TCACACGCCA CATCCACGTG CTGCGCCTGG CCGCTGGCGA TGACATCTGC CTGTTCGATG GCTCCGGCTA CGAATTTCGT GCACGGCTCG ACGCCATCAA CAAGCGCGAC GCCACCGCCA GCCTTGTCGA CGCCACGCAG CCCGACACCG AGGCGCGCTA CGCCATCACG CTCGCGCAAG GCATTGCCGG CGGCGACAAG ATGGATTGGC TGATCGAGAA GGCCGTCGAA CTGGGCGTCA ATGCCGTCGC GCCGCTGCAG ACCGAACGCG GCGTGGTGCG ACTCTCCGGC GAGCGTGCCG TCAAGCGCGT GCAGCACTGG CAGGCATTGG TGCAAGCGGC CTGCGAGCAG TGCGGCAGAG CCCGCGTGCC GGTGGTCGCA CCCGTCGCCA CGCTGCGCGA ATGGCTTGCC ACCGCCAAGT CCACCGACGC GCCGCGCGTG TTGCTGTCAC CGCGCGGCGC GCAATCGCTC ACGCAGTGGG CCGTGCAATC GCGCACGCGC ATCGTAGGCA GCGGCATCGT GCTGCTGATC GGCCCCGAAG GCGGGCTTTC GCCCGACGAG GAAGCACTTG CCGAGGCCGC CGGTTTCTTA CCACTGACAC TTGGACGACG TATTCTGAGA ACGGAATCGG CGGCGCTTGT GGCCGTCTCC GCGCTGCACG CCGTGCTCGG CGAGTTCTAG
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Protein sequence | MGLPRFFVDT PLAPNTTVTL DESVTRHIHV LRLAAGDDIC LFDGSGYEFR ARLDAINKRD ATASLVDATQ PDTEARYAIT LAQGIAGGDK MDWLIEKAVE LGVNAVAPLQ TERGVVRLSG ERAVKRVQHW QALVQAACEQ CGRARVPVVA PVATLREWLA TAKSTDAPRV LLSPRGAQSL TQWAVQSRTR IVGSGIVLLI GPEGGLSPDE EALAEAAGFL PLTLGRRILR TESAALVAVS ALHAVLGEF
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