| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2998 |
|---|
| Symbol | |
|---|
| ID | 6289473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3125611 |
|---|
| End bp | 3126624 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642626568 |
|---|
| Product | putative 2-dehydro-3-deoxygalactonokinase protein |
|---|
| Protein accession | YP_001900553 |
|---|
| Protein GI | 187930066 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.296432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCC TCACCATCGA TACCGGTACC ACCAACACAC GCGTCACGGT CTGGCGCGAT
GACGTTGCGC TTTGCCAGGC TGCGCGCCAG GTTGGTGTGC GCGATACCGC CATCACCGGC
AACCGGACGA CGCTGCAGCG CGGCGTGCAA GACACGATTG ACGCTGCGCT GCAGAAGGCC
GGTTTCGGCA TGGGCCAGGT CGACTTGGTG CTGGCCTCCG GCATGATCAC CTCCAACGTT
GGCCTGCACG AAGTCCCGCA CCTGATCGCG CCGGCCGGCC TGCGCGACCT GGCGGCCGGG
ATGGTGCAGG CGAGCATTCC CGAGGTGTGC CCTCAGCCAA TCTGGTTCGT GCCGGGCGTA
CGCAATCCGG TGGACAACCT CGGCCTGCAC AACATCGAGT CGATGGACAT GATGCGCGGC
GAAGAGGTCG AGACCATGGG TTTGGTCTCG CGCCTCGGCA TCACGGAGCC GGCGGTGATC
GTGCTGCCCG GGTCGCACTC GAAGTTCGTG CATCTGGACG CCGACCAGCG CATCACCGGC
TGTGTGACCA CGCTGGCCGG CGAGCTGCTC CACGTGATTA CCCACAACAC CATCCTGGCC
GACGCGCTCG ACTCGGACTT TGCCACCGAG GTCGATCCGG AAATGTTGCT GTCCGGCGCG
CGCAGCGCCA GCAGCATCGG ACTGGGGCGC GCCTGCTTCA TGGTGCGCAC GCTGGGCCAG
TTCACGATCT ACGAGCGCAA TGCGCGGGCC AACTTCCTGC TGGGCGCGGT GCTGGGCGCG
GATTTGCTCA CGCTCAAGAA CAGCAGCGCG ATCCGCATGA ACCCGGGCAC GCAGTTCGTC
ATCACGGGCA AGCCGCTGCT GCGCGAAGCG CTGGCCGTGC TGGTGTCGGA CGACGATTTC
TTCTCGGGCA AGGTCACCGT CACCAGCAGT GAACAGCAGG AGCACCTGGC CGGCAGCGGC
GCGATCGCCA TCGCACGCGA GCGCGGCCTG GTCAAAACCT TGAAGGTGGC GTGA
|
|---|
| Protein sequence | MNILTIDTGT TNTRVTVWRD DVALCQAARQ VGVRDTAITG NRTTLQRGVQ DTIDAALQKA
GFGMGQVDLV LASGMITSNV GLHEVPHLIA PAGLRDLAAG MVQASIPEVC PQPIWFVPGV
RNPVDNLGLH NIESMDMMRG EEVETMGLVS RLGITEPAVI VLPGSHSKFV HLDADQRITG
CVTTLAGELL HVITHNTILA DALDSDFATE VDPEMLLSGA RSASSIGLGR ACFMVRTLGQ
FTIYERNARA NFLLGAVLGA DLLTLKNSSA IRMNPGTQFV ITGKPLLREA LAVLVSDDDF
FSGKVTVTSS EQQEHLAGSG AIAIARERGL VKTLKVA
|
|---|
| |