Gene Rpic_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2997 
Symbol 
ID6289472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3124530 
End bp3125534 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID642626567 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_001900552 
Protein GI187930065 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.175655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC AACGACGCGG GACATTCAAG GCCATTGCGG CTGCCACGCT GTTTGCCATG 
GCCGGCGGCC TTTCAGTGTT TGCCCATGCA GCCGATGACG TGAAGATCGG TTTCCTGGTC
AAGCAGCCCG AAGAGCCGTG GTTCCAGGAT GAGTGGAAGT TCGCAGACCA GGCCGCCAAG
GAGAAGGGCT TCAAGCTGGT AAAGATCGGC GTGCCCAGCG GCGGCGAAGT GCTGACGGCC
ATCGACAACC TGGGCGCGCA GCACGCGCAG GGTTTCGTGA TCTGCGTGCC CGACGTGAAG
CTCGGACCTG CAGTCGTGGC CAAGGCCAAA CAGAACAACC TCAAGCTGAT GACGGTGGAT
GACCGTTTGG TGGATGGCGC CGGCAAGCCC ATCGAAGCCG TGCCGCACAT GGGCATCTCG
GCCACGAAGA TCGGCGAGCA GGTGGGCGAT GCCATCGCGC AGGAGATGAA GAAGCGCGGC
TGGAACCTGT CGGAGGTCGG CGCCATTCGC ATCGCCTACG ACCAGCTGCC GACCGCCAAG
GAGCGCACCG ACGGTGCAGT CGCCGCGCTC AGCAAGGCGG GCTTCCCGGC CGCCAACGTG
CTGACCAGCC CGCAGGCCAA GACGGATACC GAAGCCGCCT TCAACGCCGC CAACATCACC
CTGACCAAGA ACCCGAAGTT CAAGCACTGG ATTGCCTTCG GCCTGAATGA CGAAGCCGTG
CTGGGTGCCG TGCGCGCAGC GGAAGGCCAC GGCGTGAAGC CGGCGGACAT CATCGGGGTA
GGTATCGGCG GCAGCCAGTC TGCGCTCAAC GAGTTTGCCA AGCCCGAGAA GACCGGCTTC
TTCGGCACCG TGCTGATTAG CCCGAAGCGC CACGGCTATG AAACCTCGCT CAACATGTAC
GAGTGGGTCA AGAGCAACAA GGCGCCGGAC CCGCTCATCC TGACCAGCGG CCGCCTGATG
ACGCGCGACA ACGAAAAGGC CGTCCGCCAA GAGATGGGTT TGTGA
 
Protein sequence
MQQQRRGTFK AIAAATLFAM AGGLSVFAHA ADDVKIGFLV KQPEEPWFQD EWKFADQAAK 
EKGFKLVKIG VPSGGEVLTA IDNLGAQHAQ GFVICVPDVK LGPAVVAKAK QNNLKLMTVD
DRLVDGAGKP IEAVPHMGIS ATKIGEQVGD AIAQEMKKRG WNLSEVGAIR IAYDQLPTAK
ERTDGAVAAL SKAGFPAANV LTSPQAKTDT EAAFNAANIT LTKNPKFKHW IAFGLNDEAV
LGAVRAAEGH GVKPADIIGV GIGGSQSALN EFAKPEKTGF FGTVLISPKR HGYETSLNMY
EWVKSNKAPD PLILTSGRLM TRDNEKAVRQ EMGL