| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2989 |
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| Symbol | |
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| ID | 6288929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3115417 |
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| End bp | 3117432 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626559 |
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| Product | transketolase |
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| Protein accession | YP_001900544 |
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| Protein GI | 187930057 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC CCGCCCTCCA CTCGAACACC ACCCAGCCTA CCCAGTTGAT GGCCAACGCC
ATTCGCGTGC TCGCCATGGA CGCCGTCCAG CAAGCCAATT CGGGCCACCC TGGCGCGCCG
ATGGGCATGG CGGATATCGC CGTGGCACTG TGGAGCCGCC ACCTGCGCCA CAACCCGCTG
AACCCGCGCT GGCCTGATCG TGACCGTTTC GTGCTGTCCA ACGGCCACGG CTCGATGCTG
ATCTACGCGC TGCTGCACCT CACCGGCTAC GACCTGCCGA TGTCGGAACT GAAGAATTTC
CGCCAGTTGC ACAGCAAGAC CGCCGGCCAC CCGGAATACG GCATCACCCC GGGCGTGGAA
ACCACCACCG GCCCGCTCGG CCAAGGCATC ACCAACGCCG TCGGCATGGC CCTGGCTGAA
CGTCTGCTGG GTCAGGAATT CAATCGCCCG GGCTTTGACA TCGTCAACCA TCACACCTAT
GTCTTCCTGG GCGACGGCTG CCTGATGGAA GGCATCAGCC ACGAAGCCTG CTCGCTGGCC
GGCACGCTCA AGCTGAACAA GCTGATCGCG CTGTGGGACG ACAACGGCAT CTCGATCGAC
GGCGACGTCG TCCACTGGTT CAACGACGAC ACCCCGAAGC GCTTCGAAGC CTACGGCTGG
AACGTGATCC GCGCCGTGGA CGGCCACAAC GTTGACGCCG TGGACGCCGC CATTGCCGAG
GCCAAGAAGT CCGACAAGCC GACCCTGATC TGCTGCCGCA CGCTCATCGG CAAGGGTGCG
CCCAACAAGG AAGGCGGCCA CGACGTGCAT GGCGCCCCGC TGGGCGGCGT TGAAATCGCC
GCTGCGCGCG AAGCGCTGGC TTGGCCGCAC GCCCCGTTCG AAGTCCCGCA AGCCGTGTAC
GACGCCTGGG ATGCCAAAGG GCAGGGCCAG GCGCTGGAAA AGGCCTGGAA CGCGCTGTTC
GATGCATATT CCGACCGCTA CCCCGCCGAA GCCGAACAAT TCGAGCGCCG CATGCGCGGC
GAACTGCCCG CCAGCTTCGA GAAGGCCGTC GACGAGTTCA TCGAGAAATG CGAACTCAAG
GCTGAGACCA TCGCCACCCG CAAGGCCAGC CAGAACACGC TTGAAGCCTA CGCCCCGGTC
CTGGGCGAGC TGCTGGGCGG CTCGGCCGAT CTGACCGGTT CGAACCTGAC CAACTGGAGC
GGCAGCAAGG CCGTGCGCGT GGAAGCCTGG GGCAACCACA TCAACTACGG CGTGCGTGAG
TTCGGCATGA GCGCCATCAT GAACGGCATC GCGCTGCACG GCGGCTACAT TCCGTACGGC
GGCACGTTCC TCACGTTCTC CGACTACAGC CGCAACGCGC TGCGCATGGC CGCGCTGATG
AAGATCCGCT CGATCTTCGT CTTCACGCAC GATTCCATCG GCCTGGGCGA AGACGGCCCG
ACGCACCAGT CCATCGAGCA CGTTGCCAGC CTGCGCCTGA TCCCGAACAT GGATGTCTGG
CGCACCGCCG ACACGACCGA AACCGCCGTT GCCTGGGCCG CTGCCATCGA GCGCCAGAAC
GGCCCGAGCT GCCTGATCTT CAGCCGCCAG AACCTGCCGT TCCAGGCGCG CAACCCGGCC
ACGCGCGAAG CCATCGCGCG CGGCGGCTAT GTGCTGCGCG ATGCGGCCAA CGGCAAGCCG
GACGTGGTCA TCATCGCCAC CGGCTCGGAA GTTGGCCTGG CGGTCGGTGC AGCAGACCAG
CTCGCCGCCG AGGGAATCCA CGCGCGCGTG GTTTCCGTGC CCGCCACCAC CGTGTTCGAT
AAACAGGATT CGGCCTACAA GGCGAGCGTG CTGCCGGCCG GCGTGCCGCG CATCGCCGTG
GAAGCGGGCG TGACCGATTT CTGGTGGAAG TACCAGGTAC AAGCCGTGGT CGGTATCGAC
ACGTTCGGTG AATCCGCCCC GGCAGGTGTG CTGTTCAAGC ACTTCGGCTT CACCGTCGAG
AACGTGGTGA ACACCGCCAA GAGCGTCATT GCTTAA
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| Protein sequence | MTAPALHSNT TQPTQLMANA IRVLAMDAVQ QANSGHPGAP MGMADIAVAL WSRHLRHNPL
NPRWPDRDRF VLSNGHGSML IYALLHLTGY DLPMSELKNF RQLHSKTAGH PEYGITPGVE
TTTGPLGQGI TNAVGMALAE RLLGQEFNRP GFDIVNHHTY VFLGDGCLME GISHEACSLA
GTLKLNKLIA LWDDNGISID GDVVHWFNDD TPKRFEAYGW NVIRAVDGHN VDAVDAAIAE
AKKSDKPTLI CCRTLIGKGA PNKEGGHDVH GAPLGGVEIA AAREALAWPH APFEVPQAVY
DAWDAKGQGQ ALEKAWNALF DAYSDRYPAE AEQFERRMRG ELPASFEKAV DEFIEKCELK
AETIATRKAS QNTLEAYAPV LGELLGGSAD LTGSNLTNWS GSKAVRVEAW GNHINYGVRE
FGMSAIMNGI ALHGGYIPYG GTFLTFSDYS RNALRMAALM KIRSIFVFTH DSIGLGEDGP
THQSIEHVAS LRLIPNMDVW RTADTTETAV AWAAAIERQN GPSCLIFSRQ NLPFQARNPA
TREAIARGGY VLRDAANGKP DVVIIATGSE VGLAVGAADQ LAAEGIHARV VSVPATTVFD
KQDSAYKASV LPAGVPRIAV EAGVTDFWWK YQVQAVVGID TFGESAPAGV LFKHFGFTVE
NVVNTAKSVI A
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