Gene Rpic_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2988 
Symbol 
ID6288928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3114332 
End bp3115330 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content62% 
IMG OID642626558 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001900543 
Protein GI187930056 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.282896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA AGATCGGCAT CAACGGCTTC GGCCGCATCG GACGCATGGT GTTCCGCGCC 
GCCGCCGCCA ACTTCAAGGA CATCGAAGTT GTTGCCATCA ACGACCTGCT CGAGCCCGAC
TACCTGGCGT ACATGCTGAA GTACGACTCG GTGCACGGCC GCTTCGACGG TGAAGTGTCG
GTCGACGGCA ACACGCTCGT CGTCAACGGC AAGAAGATCC GCCTGACCGC CGTGAAGGAC
CCGTCCGAGC TGAAGTGGGG CGAAGTCGGC GCCGACGTGG TGATCGAATC GACCGGCATC
TTCCTGACCA AGGAAGGCGC GCAGAAGCAC ATCGACGCGG GCGCCAAGAA GGTGATCATG
TCGGCCCCGT CGAAGGACGA CACCCCGATG TTCGTGTACG GCGTGAACCA CGAAACGTAC
AAGGGCGAGG CGATCATCTC CAACGCTTCG TGCACGACCA ACTGCCTCGC ACCGGTTGCC
AAGGTGCTGA ACGACAAGTG GGGCATCAAG CGCGGCCTGA TGACGACCGT GCACGCTGCC
ACTGCCACGC AGAAGACCGT TGACGGCCCG TCCAACAAGG ACTGGCGCGG CGGCCGCGGC
ATCCTGGAAA ACATCATCCC GTCGTCCACT GGCGCCGCCA AGGCCGTGGG CGTGGTGATT
CCGCAGCTGA ACAAGAAGCT GACCGGCATG TCGTTCCGCG TGCCGACCTC GGATGTGTCG
GTCGTCGACC TGACCGTCGA GCTGGAAAGC GCCGCCACGT ACGCTGAAAT CTGCGCCGAA
ATGAAGGCAC AGAGCGAAGG CCCGCTGAAG GGCGTGCTCG GCTACACCGA AGACAAGGTC
GTCGCTACGG ATTTCCGCGG CGATGCACGC ACCTCCATCT TCGACGCCGA AGCCGGCATC
GCACTGGATG GCACCTTCAT CAAGGTCGTG AGCTGGTACG ACAACGAGTG GGGCTATTCG
AACAAGTGCC TGGAAATGGC ACGTGTGGTG GGCAAGTAA
 
Protein sequence
MTIKIGINGF GRIGRMVFRA AAANFKDIEV VAINDLLEPD YLAYMLKYDS VHGRFDGEVS 
VDGNTLVVNG KKIRLTAVKD PSELKWGEVG ADVVIESTGI FLTKEGAQKH IDAGAKKVIM
SAPSKDDTPM FVYGVNHETY KGEAIISNAS CTTNCLAPVA KVLNDKWGIK RGLMTTVHAA
TATQKTVDGP SNKDWRGGRG ILENIIPSST GAAKAVGVVI PQLNKKLTGM SFRVPTSDVS
VVDLTVELES AATYAEICAE MKAQSEGPLK GVLGYTEDKV VATDFRGDAR TSIFDAEAGI
ALDGTFIKVV SWYDNEWGYS NKCLEMARVV GK