Gene Rpic_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2972 
Symbol 
ID6287121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3094683 
End bp3096143 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content63% 
IMG OID642626542 
ProductNAD(P)(+) transhydrogenase (AB-specific) 
Protein accessionYP_001900527 
Protein GI187930040 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA ACCTTGTCAC CCTGCTGTAT CTGCTGGCTT CCGTCTGCTT CATCCAGGCG 
CTCAAGGGGC TTTCGCATCC GACCACGGCG CGGCGCGGCA ACGCGTTCGG CATGACGGGC
ATGGCGATTG CCGCCGTCAC GACCGTCGCA CTGATCTACA AGCTCAAGGC CGAGATGTTT
GCCGGCACTG AGAGCGGCAC ATCCACGGGT TTCATCCTGA TCTTCGCGGG CCTGGTGGTG
GGCGGGGGCA TCGGCGCCTA TGTGGCGCGC ACGGTCGAGA TGACCAAGAT GCCTGAGCTG
GTGGCCGCCA TGCACTCGCT GATCGGTCTG GCCGCAGTGT GTATTGCCGT CGCTGCGGTA
GCCGAACCGT CTGCCTTCGG CATCACGATG GCCGGCGACA ACGTGCTGCC CCTGGGCAAC
CGCGTGGAGC TGTTCATCGG CACGTTCGTC GGCGCCATCA CGTTTTCGGG TTCGGTGATC
GCCTTCGGCA AGCTGTCGGG CAAATACAAG TTCCGCCTGT TCCAGGGCGC GCCGGTGCAG
TTTGCCGGCC AACACATGCT GAACCTGCTG CTGGCGGTGG CCATGCTCGG CTTCGGCATC
CTGTTCTTCC TGAGCCAGAG CTGGCTGCCG TTCATCATCA TGACGGCCAT CGCCTTTGTG
CTGGGCGTGC TGATCATCAT CCCCATTGGC GGCGCAGACA TGCCGGTGGT GGTGTCGATG
CTGAATTCGT ATTCGGGCTG GGCGGCGGCC GGCATCGGCT TCTCGCTCAA CAACCCGATG
CTGATCATTG CCGGCTCGCT GGTCGGGTCA TCCGGTGCAA TTCTGTCTTA CATCATGTGT
AGGGCGATGA ACCGGTCGTT CTTCAACGTG ATCCTGGGCG GCTTCGGTTC TGAAGCATCC
GCCGGGGCCG CAGCAGGTGG CGGCGGACAG CAGCGCCCGG TCAAATCGGG CTCGCCGGAT
GATGCAGCCT TCCTCATGGG CAACGCCGAG ACGGTCATCA TCGTCCCCGG CTATGGCCTG
GCCGTGGCGC GCGCGCAGCA CGCCCTGAAG GAACTGACCG AAAAGCTGTC GGACAAGGGC
GTGACCGTCA AATACGCGAT CCACCCGGTC GCAGGCCGCA TGCCGGGCCA CATGAACGTG
CTGCTGGCCG AAGCCGAAGT GCCTTACGAC CAGGTCTTCG AGATGGAAGA CATCAACGGT
GAGTTTGGCC AGGCCGACGT GGTGCTGGTG CTGGGCGCCA ACGACGTGGT CAACCCGGCG
GCCAAGAACG ATCCGAAGTC GCCCATTGCC GGCATGCCGA TCCTGGAGGC CTACAAGGCC
AAGACCATCA TCGTGAACAA GCGCTCGATG AACGCCGGCT ATGCCGGGCT GGACAACGAG
CTGTTCTACA TGGACAAGAC GATGATGGTG TTTGGCGACG CCAAGAAGGT CGTTGAGGAC
ATGGTGAAAT CCGTCGAGTA A
 
Protein sequence
MSMNLVTLLY LLASVCFIQA LKGLSHPTTA RRGNAFGMTG MAIAAVTTVA LIYKLKAEMF 
AGTESGTSTG FILIFAGLVV GGGIGAYVAR TVEMTKMPEL VAAMHSLIGL AAVCIAVAAV
AEPSAFGITM AGDNVLPLGN RVELFIGTFV GAITFSGSVI AFGKLSGKYK FRLFQGAPVQ
FAGQHMLNLL LAVAMLGFGI LFFLSQSWLP FIIMTAIAFV LGVLIIIPIG GADMPVVVSM
LNSYSGWAAA GIGFSLNNPM LIIAGSLVGS SGAILSYIMC RAMNRSFFNV ILGGFGSEAS
AGAAAGGGGQ QRPVKSGSPD DAAFLMGNAE TVIIVPGYGL AVARAQHALK ELTEKLSDKG
VTVKYAIHPV AGRMPGHMNV LLAEAEVPYD QVFEMEDING EFGQADVVLV LGANDVVNPA
AKNDPKSPIA GMPILEAYKA KTIIVNKRSM NAGYAGLDNE LFYMDKTMMV FGDAKKVVED
MVKSVE