Gene Rpic_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2956 
SymbolqueA 
ID6287484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3078885 
End bp3079964 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content66% 
IMG OID642626526 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001900511 
Protein GI187930024 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC TGTCCGATTT CGATTTCGAT CTGCCGCCTG AGCTGATCGC ACAAACCGCC 
CTGCCCGACC GCACCGCGAG CCGCCTGCTG GCCGTACGCC GTACGGAAGA TGCCGTGCAT
TTTGAAGACC GCCAGTTTGC CGACCTGGTC GACTACCTGC GCCCCGGCGA CCTGCTGGTC
TTCAACGACA CGCGCGTCAT CAAGGCACGC TTTTTTGGCC ACAAAGCCAG CGGCGGCAAG
GTGGAGGTGC TTGTCGAGCG CCTGCTGGAC GAACACACGG TGCTGGCGCA GATCCGCTCC
AGCAAGTCGC CCGTCGAGGG CACCTCGCTG CGCCTGGCCG ACGCCTTTGA CGTGACGGTC
GGACCGCGCG CCGAGCCGTT CTTTACGTTG CGTTTCCCGC AGCCGGCGCT CGATCTGATC
GAGCAGTACG GCCGCCTGCC GCTGCCGCCC TACATCGAGC ACGACCCCGA CAGCTTCGAC
GAGACGCGCT ACCAGACCGT CTATGCGCGC AACCCGGGCG CCGTCGCGGC ACCCACGGCC
GGTCTGCATT TCGACGATGC GCTGTTCGCC AAGCTGGACG CCATGGGCAT CCGGCGCGGT
TTTCTCACGC TGCACGTCGG TGCCGGCACG TTCCAGCCGG TGCGCGTGGA AAACATTGCC
GAGCACCGCA TGCACAGCGA GTGGTACGAA ATTACGCCCG AACTGGCCGA AGCGATCCGC
GCCACGCGCG CAGCCGGCGG CCGCGTGATC GCGGTCGGCA CAACGTCGAT GCGCGCGCTT
GAATCGGCCG CGCAGCCGGA TGGCACGCTC AATGCCTGCA GCGGCGAGAC CGACATCTTC
ATCACCCCCG GCTACCGCTT CCGCGCCGTC GACCTGCTGG TGACGAACTT CCACCTGCCC
AAGTCGACCT TGCTGATGCT GGTATCGGCG TTTGCCGGCA TGAGCGCCAT CCGTGAGGCC
TATCAGCACG CCATCGCCCA GCGCTACCGC TTCTTCAGTT ACGGCGACGC CATGCTGCTG
ACGCGCGCCC CCACCGAACC CGGCGAACCC GGCGAACCCG GCGAAACCCA ATCGCTCTGA
 
Protein sequence
MLTLSDFDFD LPPELIAQTA LPDRTASRLL AVRRTEDAVH FEDRQFADLV DYLRPGDLLV 
FNDTRVIKAR FFGHKASGGK VEVLVERLLD EHTVLAQIRS SKSPVEGTSL RLADAFDVTV
GPRAEPFFTL RFPQPALDLI EQYGRLPLPP YIEHDPDSFD ETRYQTVYAR NPGAVAAPTA
GLHFDDALFA KLDAMGIRRG FLTLHVGAGT FQPVRVENIA EHRMHSEWYE ITPELAEAIR
ATRAAGGRVI AVGTTSMRAL ESAAQPDGTL NACSGETDIF ITPGYRFRAV DLLVTNFHLP
KSTLLMLVSA FAGMSAIREA YQHAIAQRYR FFSYGDAMLL TRAPTEPGEP GEPGETQSL