Gene Rpic_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2952 
Symbol 
ID6289408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3072784 
End bp3073794 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content60% 
IMG OID642626522 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_001900507 
Protein GI187930020 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.234735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTCA CAATCGGTCT TTTCCTGATA TCGGCAGGCG CCATCTATTT GGCCTGCGAG 
TACTTCGTCA ACGGCATTGA ATGGTGCGGC AAGCGACTGA ATCTCGGCGC CACAGCCGTC
GGCTCGGTGT TGGCCGCCTT TGGCACAGCA CTGCCTGAAA GTGCCGTCAC GTTCGTTGCC
GTGGTCTTCG GTTCGACGCC TGAGCAGAAA GATCTCGGCG TCGGTGCTGC GATGGGCGGC
CCGCTTGTTC TGGCCACACT CGCATATGCG GTAGTTGGTT TGGCGTTGAT GATGAATCGA
CGCGAGCTTG GCCGTCCCAC CGCGGAAGTC AAAGTCGACC ATGCACGCAT GAGCCGGGAC
CAGGCCGCTT TCCTGGGCGC CTTTGTTGTC AAGGTTGCCC TGGGGCTTGT TGCCTTTGCA
TACAAGCCTT GGCTGGGCAT TCTTTTCCTG GTCGCCTATG CGATCTATGT CTGGCGCGAG
ATCAAGGACA GTGACACGGC ACCTGAAGAA GAGGAACTGG AGCCCCTCTC GATTCGCCCG
AAGTTGGCGG AACCTCCACT GGGGTGGGCC GTGCTGCAAG TGCTGCTCGC GCTGGTCGTG
ATTGGCGGCG CTTCACACGT CTTTGTGGCA CAGCTTGAAG CGATTGGCAC AGCGCTGCAC
TGGCCAGCAC ACCTTGTCGC GCTATTGCTC AGCCCCGTTG CGACGGAGTT GCCCGAGACG
ATGAACGCTC TGATTTGGGT CCGCCGGGGC AAGGAACGCC TCGCCCTGGC AAACATCTCG
GGGGCCATGA TGATTCAGGC CACCATCCCG AGTGCACTGG GGATCTTCTA CACTCCATGG
CGATTTGACG GGCCGCTGCT TGCGTCCGGC ATCATTACTG CGGTCGCCAT CTTGTTCTTG
TGGATGATGT TCCGGCGCGG AGTCGTGCAT GGGCGAACCC TGGTAGCAGT CAGCTCTTTG
TACGCGCTTT TTGCGTTTGT TCTCGCGATC GGGTTTCCAG TGACCCGCTA A
 
Protein sequence
MLLTIGLFLI SAGAIYLACE YFVNGIEWCG KRLNLGATAV GSVLAAFGTA LPESAVTFVA 
VVFGSTPEQK DLGVGAAMGG PLVLATLAYA VVGLALMMNR RELGRPTAEV KVDHARMSRD
QAAFLGAFVV KVALGLVAFA YKPWLGILFL VAYAIYVWRE IKDSDTAPEE EELEPLSIRP
KLAEPPLGWA VLQVLLALVV IGGASHVFVA QLEAIGTALH WPAHLVALLL SPVATELPET
MNALIWVRRG KERLALANIS GAMMIQATIP SALGIFYTPW RFDGPLLASG IITAVAILFL
WMMFRRGVVH GRTLVAVSSL YALFAFVLAI GFPVTR