| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2945 |
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| Symbol | |
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| ID | 6287769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3063879 |
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| End bp | 3065033 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626515 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001900500 |
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| Protein GI | 187930013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.905544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGGAA TCTGGGGGCA AAAGCGCTCG GAAGCTGCGC CCACACCATC GTATGCAGCC
GCGCCGGTCA CCGTGCCAGC GCCACCCTCA CGCGATGGGC AGGCCGTGAC CTTGAGCCAG
GGCCAATTGC AGTACATCAA GGTTGCGCCC GTAGAGTTGC GCGAATTCGC CAACCGGCGC
GAGGCGGTGG GCAATATCGA CTTCAACGAG GACCGCGCTG TGCAGGTCTT CACGTCGTAC
CAAGGCAAGA TCCGCAACAC CTACGCCAAG GTGGGCGACA TCGTTGCCAA GGGCAAGCCG
CTGTTCGATA TCGACAGCCC TGATCTGGTG CAAGCGGAAT CCACGCTGAT TTCCACTGCT
GGTACGCGCA AGTTGACGAC TGATGCGCTC GCTCGTGCGC GCCAGTTGTA TGAGATCCAG
GGCCTGGCAC AGAAGGATCT GGACCAGGCT ATCTCCGACC AGCAAGCCGC CGAGGCGGCC
TACAAGGCCG CGCGTGAAGC CCTGGCTGTG TTCGGCAAGA CGCCCGCACA GATGGACCAG
ATCGTGCAGA CGCGCAAGAC TGATTCGCTG CTGACGGTGG TGAGCCCGAT CTCGGGCCAG
GTGACCGCGC GCAGCGCGCA GCCAGGCTTG CTCTTGCAGC CCGGCAACGG TACGGCGCCA
TTCACGGTGG CTGATGTGTC CACCATGTGG ATGCAGGCGT TCGTGCCGGA AGCCGATGCA
CCGCTGCTGC ACGTCGGCCA GCCGGTCAAG ATTCACGTCA TGGCGTTCCC AAGCCGGGTC
TTCAACGGCA AGATCACCAC CGTGGGTGCA TCGGTCGACG CCAACACGCA CCGCATCCTG
GTGCGTTCGG AAATCGACGA CCCGAAGCAC GAACTGCGCC CCGGCATGTT CACTTCATTC
GACATCACCA CCGGCGCGCC CATCCAATCC CCAGCGTTGG CGATGGACGG CGTGGTCCGC
GAAGGCGACG GCACCATGAC CGCGTGGGTT ACGACCGACC GCAAGCGCTT TGCGCGGCGC
GTGATCAAGC TTGGCCTGGA GCAGGATGGC TTTGTGCAGG TGCTCGAAGG CCTGAACGCA
GGCGAGCTGG CCGCCAACGA AGGGGCACTG TATCTGAGCA CGGCTGCCTC CGGCAGCGTC
AATAGCGCTA ATTGA
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| Protein sequence | MWGIWGQKRS EAAPTPSYAA APVTVPAPPS RDGQAVTLSQ GQLQYIKVAP VELREFANRR
EAVGNIDFNE DRAVQVFTSY QGKIRNTYAK VGDIVAKGKP LFDIDSPDLV QAESTLISTA
GTRKLTTDAL ARARQLYEIQ GLAQKDLDQA ISDQQAAEAA YKAAREALAV FGKTPAQMDQ
IVQTRKTDSL LTVVSPISGQ VTARSAQPGL LLQPGNGTAP FTVADVSTMW MQAFVPEADA
PLLHVGQPVK IHVMAFPSRV FNGKITTVGA SVDANTHRIL VRSEIDDPKH ELRPGMFTSF
DITTGAPIQS PALAMDGVVR EGDGTMTAWV TTDRKRFARR VIKLGLEQDG FVQVLEGLNA
GELAANEGAL YLSTAASGSV NSAN
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