Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2943 |
Symbol | |
ID | 6287032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3060067 |
End bp | 3060672 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642626513 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001900498 |
Protein GI | 187930011 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCAG CCAACCCCAA GATCCTCTGC ATTGAAGACG ACGTTGAAAC CGCCGAGTTG ATCACCGAAG AACTGGCCGA ACACGGCTAC ACCGTGATCA CGGCGAACGA TGGTGAGTCC GGGCTGGCGA TGCTCCTGCG CGAAGCCCCC GATCTGGTGC TGTGCGACGT AGGCATGCCG GGCATGACCG GGTTCGAGTT GCTGGAGCAA TTGCGCACGC TCGCGCCACG TTATGCTGAA ATTCCGTTCG TCTTTTTGAC GGCGATGGCG CAACGCGACT CTGAACTGCG TGGGCGTCGC CTGGGTGCTG ATGACTATGT GACCAAACCG GTCGACTTCG AAATCCTGAT GAGCATTGTG CAGACCCGGC TCGCCAGACG GCCGCGCACG CATACCGCAC ATCCGCCCGT ACAACTGAGC GAGCGTGAGG TCGAGGTGCT AGCATGGTCT GCGCGCGGCA AGACATCGGG TGAGATCGCC ACGATTCTTG GGCTCTCCAA GCGCACGGTC GATTTCCATA TGGACAATGC GCGCGAAAAG CTGGGCGTCG CCACGCGCAT CGAAGCCGTG GTCAGGGCTT CCAGCTCGGG CATTATCAAA CCATAG
|
Protein sequence | MKPANPKILC IEDDVETAEL ITEELAEHGY TVITANDGES GLAMLLREAP DLVLCDVGMP GMTGFELLEQ LRTLAPRYAE IPFVFLTAMA QRDSELRGRR LGADDYVTKP VDFEILMSIV QTRLARRPRT HTAHPPVQLS EREVEVLAWS ARGKTSGEIA TILGLSKRTV DFHMDNAREK LGVATRIEAV VRASSSGIIK P
|
| |