| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2921 |
|---|
| Symbol | ubiA |
|---|
| ID | 6288787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3034581 |
|---|
| End bp | 3035423 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642626491 |
|---|
| Product | 4-hydroxybenzoate octaprenyltransferase |
|---|
| Protein accession | YP_001900476 |
|---|
| Protein GI | 187929989 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.472236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTATG CGCGCCTGAT GCGCATGGAC AAACCGATCG GCACGCTGCT GCTGCTGTGG
CCGACGCTGT GGGCGCTATG GATGGCCGCC GATGGCCATC CGCCGGTGTC GCTGGTGGTG
ATCTTCACGG TCGGCACGTT CCTGATGCGC TCGGCCGGTT GCGCGGTCAA CGACTGGGCG
GATCGTGACT TTGACAAGCA CGTCAAGCGC ACCAAGGAGC GGCCGATCAC CGCGGGCCTG
ATTGCCCCCT GGGAGGCGCT GGCGGTAGCC GCGGTGCTCT CGCTCATCGC CTTCACGTTG
ATCCTGCCAC TCAATGCGCT GACAAAGTGG ATGTCGGTGG CCGCCATCGT GATTGCCGGC
ACGTATCCGT TCTTCAAGCG GTTCTTCGCG ATTCCGCAGG CGTACCTCGG CATTGCGTTC
GGGTTTGGGA TTCCGATGGC GTACGCGGCG GTGCAGGATC AGGTGCCGGT GCTGGCGTGG
CTGATGCTTG CCGGCAATGT CTTCTGGGCC GTCGCCTACG ACACGGCGTA CGCGATGGTC
GACCGCGATG ACGATTTGCT CATCGGCATC AAAACCTCAG CCATTACTTT TGGACGTTTT
GACGTGGCGG CGATCATGCT GTGCTACGCG GGGTTCTTCG GGATCATGGC CTGGGCTGGC
CATGTGATGG CACTCAGCGT GGCGTACTGG ATTGGGTTTG CCGCTGCCGT GGCGTTGTCG
CTTTGGTATT TCCCGATGCT ACAGACGCGT GATCGGATGA AGTGCTTTTT TGTTTTCCGG
CATAACAATT GGCTGGGGGC CTGTTTGTTT GCCGGGGTGG CGGGGGCGTA TTTGCTGCGC
TAG
|
|---|
| Protein sequence | MLYARLMRMD KPIGTLLLLW PTLWALWMAA DGHPPVSLVV IFTVGTFLMR SAGCAVNDWA
DRDFDKHVKR TKERPITAGL IAPWEALAVA AVLSLIAFTL ILPLNALTKW MSVAAIVIAG
TYPFFKRFFA IPQAYLGIAF GFGIPMAYAA VQDQVPVLAW LMLAGNVFWA VAYDTAYAMV
DRDDDLLIGI KTSAITFGRF DVAAIMLCYA GFFGIMAWAG HVMALSVAYW IGFAAAVALS
LWYFPMLQTR DRMKCFFVFR HNNWLGACLF AGVAGAYLLR
|
|---|
| |